Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq15037 93.3 5e-14 >seq15037 Length=1530975 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||| ||||||| | ||||| | |||||| ||||| || || | || || || || Sbjct 1039596 GTGAAAATGTATCTCGGACTGGCGGAATCCTTTCCACCAGCAAGTCTTGTACCGAATTGA 1039537 Query 152089 CCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACA 152148 || ||||| || || || | ||||||| || ||||||||||| || | ||| || Sbjct 1039536 CCGATGGGCTGTAGCAGATTAATGTTGTTGCTACCTACGAAATTCTGCGCGAGATTAACT 1039477 Query 152149 ATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCC 152208 || || || ||| || |||||||| ||||| || | || || |||| |||| Sbjct 1039476 ATGGTCGCCATCAGGGACGTCTCACCGTGATGATAAGCAGAATGTTCGGCGACAGATCCT 1039417 Query 152209 GCCAACTGCGCCACCTTCA 152227 ||||| ||||| || |||| Sbjct 1039416 GCCAATTGCGCGACTTTCA 1039398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547110804564200