Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_028813.1 Length=57766 Score E Sequences producing significant alignments: (Bits) Value seq14041 82.4 3e-11 >seq14041 Length=20782 Score = 82.4 bits (90), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 3/89 (3%) Strand=Plus/Plus Query 43012 TGTGGGAGACGGAGCAGATGGACCTGTTCTCCGGGCACTCGGTGCCGTACTCGGAGACCT 43071 ||||||||||| |||| ||||| ||| |||| ||||| ||||| ||||| || || Sbjct 20300 TGTGGGAGACGATGCAGCCTGACCTCTTC---GGGCGCTCGGCGCCGTTCTCGGCGATCT 20356 Query 43072 TGCCGACCTCGGGTATGACGCGCAATGGA 43100 |||||| |||||||||||||| |||||| Sbjct 20357 GGCCGACATCGGGTATGACGCGGAATGGA 20385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184695863641344