Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq9895 84.2 2e-11 >seq9895 Length=179237 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 ||||||||||| | | ||||| ||| ||||| ||||| || || || || || || | | Sbjct 34865 CCGCCTCGCAAACGCAGCACCAAGTGTAAAGTAGATTCCTTCTGGATGTTATAGTCTGAC 34924 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCT 101125 | ||| || ||||||||||||||| || ||| | || | |||||||||||| Sbjct 34925 AAAGTCCTGCCATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCT 34978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409584016636161