Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25] 15,379 sequences; 300,316,566 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15293 120 7e-22 seq10177 113 1e-19 seq9764 109 1e-18 seq9895 84.2 5e-11 >seq15293 Length=768699 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| || ||||| ||||| ||||| |||||||| || ||||| |||| ||||| Sbjct 125708 CTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTTTGAATATTGTAGTCGGACAAAGTC 125767 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| || || ||| || ||||| || || || || || || | | || ||| Sbjct 125768 CGTCCATCCTCCAGCTGTTTGCCCGCGAAAATCAGTCTTTGTTGATCGGGAGGAATGCCT 125827 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| || |||| | |||| || || || || | Sbjct 125828 TCTTTATCTTGAATTTTCGCTTTCACGTTCTCGATCGTGTCAGACGCTTCGACCTCCAAT 125887 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || |||||||| || ||||||||||| ||||| | |||||| Sbjct 125888 GTGATAGTTTTACCAGTGAGAGTCTTGACGAAAATCTGCAT 125928 Score = 116 bits (128), Expect = 9e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || || || ||||||||||| || | | || | || || Sbjct 126856 GAGAACCAAATGCAATGTCGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTC 126915 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| |||||||| || | |||||||| || | | |||||||||||| || Sbjct 126916 TTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCCTTGTC 126975 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||||||| ||||||| | || | | ||||| ||| ||||| | || ||||| Sbjct 126976 TTGAATTTTTGCTTTGACATTTTCGATCGTATCTGATGCCTCAACTTCCAACGTGATAGT 127035 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| ||||| || || || || |||| |||||| Sbjct 127036 TTTTCCCGTCAGGGTTTTGACAAAGATTTGCATT 127069 Score = 111 bits (122), Expect = 4e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || || |||||||| ||||| ||||| | | ||| | || ||||| || ||||| | Sbjct 127328 GTTGATTCTTTTTGAATGTTATAATCAGAGAGAGTACGACCGTCTTCAAGTTGCTTT--C 127385 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| | | |||||| || | | ||| |||||||| ||||| || ||| || Sbjct 127386 CGGCGAAGATCAAACGCTGCTGATCAGGTGGGATGCCTTCCTTATCTTGGATCTTTGCTT 127445 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 | || |||| | | | || ||| ||| ||||| ||||| || || || || || | | Sbjct 127446 TTACGTTCTCAATGGTATCAGAAGCCTCGACTTCCAGAGTTATGGTCTTCCCGGTCAACG 127505 Query 152086 TCTTCACGAAGACCTGCAT 152104 |||||||||| | |||||| Sbjct 127506 TCTTCACGAAAATCTGCAT 127524 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | ||||| || || ||||||||||| || | | || | || || Sbjct 126172 GAGAACCAAATGCAATGTAGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTC 126231 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| |||||||| || | |||||||| || | | ||||||||| || || Sbjct 126232 TTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTC 126291 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| ||| || | || | |||| || ||| ||||| ||||| || || Sbjct 126292 TTGAATTTTAGCTTTCACGTTTTCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGT 126351 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || || || || | ||||| Sbjct 126352 TTTGCCGGTGAGCGTTTTGACAAAAATTTGCAT 126384 Score = 104 bits (114), Expect = 5e-17 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || || |||||||| ||||| ||||| | | ||| | || ||||| || ||||| | Sbjct 127100 GTCGATTCTTTTTGAATGTTATAATCAGAGAGAGTACGGCCGTCTTCAAGTTGCTTT--C 127157 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 |||||||||| | | |||||| || | | ||| |||||||| || |||||||| || Sbjct 127158 CGGCGAAGATCAAACGCTGCTGATCAGGTGGGATGCCTTCCTTGTCCTGAATTTTGGCTT 127217 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | ||||| ||| ||||| | || |||||||| ||||| || | Sbjct 127218 TGACGTTTTCGATCGTATCTGATGCCTCAACTTCCAACGTGATAGTTTTTCCCGTCAGGG 127277 Query 152086 TCTTCACGAAGACCTGCATT 152105 | || || |||| |||||| Sbjct 127278 TTTTGACAAAGATTTGCATT 127297 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || || || ||||||||||| || | | || | || || Sbjct 126400 GAGAACCAAATGCAATGTCGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTC 126459 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| |||||||| || | |||||||| || | | ||||||||| || || Sbjct 126460 TTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTC 126519 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| ||| || | || | |||| || ||| ||||| ||||| || || Sbjct 126520 TTGAATTTTAGCTTTCACGTTTTCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGT 126579 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || || || || | ||||| Sbjct 126580 TTTGCCGGTGAGCGTTTTGACAAAAATTTGCAT 126612 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || | ||| | || || || || ||||||||||| || | | || | || || Sbjct 126628 GAGAACCAAATGCAATGTCGATTCCTTCTGGATGTTGTAGTCAGAAAGTGTGCGGCCGTC 126687 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| |||||||| || | |||||||| || | | ||||||||| || || Sbjct 126688 TTCAAGCTGTTTTCCGGCGAAAATTAATCTCTGCTGATCTGGAGGGATTCCTTCTTTGTC 126747 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||||||| ||| || | || | |||| || ||| ||||| ||||| || || Sbjct 126748 TTGAATTTTAGCTTTCACGTTTTCAATCGTGTCGGATGCCTCAACTTCCAGAGTGATTGT 126807 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| || || || || | ||||| Sbjct 126808 TTTGCCGGTGAGCGTTTTGACAAAAATTTGCAT 126840 >seq10177 Length=3058365 Score = 113 bits (124), Expect = 1e-19 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151915 CTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAAGA 151974 ||||||| || |||||||||| | ||| | ||||| || || ||| || ||||||| Sbjct 2346113 CTTTTTGAATATTGTAATCGGACAGAGTACGTCCATCCTCCAGCTGTTTGCCAGCGAAGA 2346172 Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034 | || | ||| || || | | ||||||||||| || || || || |||||| ||| Sbjct 2346173 TGAGTCGCTGTTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCT 2346232 Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | | | | || ||| |||||| || || || || ||||| |||||||| || ||||||| Sbjct 2346233 CGATGGTATCGGAAGCCTCTACCTCGAGGGTGATGGTTTTACCCGTGAGGGTTTTCACGA 2346292 Query 152095 AGACCTGCAT 152104 | | |||||| Sbjct 2346293 AAATCTGCAT 2346302 >seq9764 Length=1320143 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || |||||||| ||||||||||||| | ||||| || ||| Sbjct 200086 AGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTACCGTCT 200027 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | || || || | | || ||||| || ||| Sbjct 200026 TCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTATCT 199967 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || | |||| | || || || |||||||| || || ||| Sbjct 199966 TGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGGGTGATGGTT 199907 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || |||||||| || ||||||| ||||||| Sbjct 199906 TTCCCAGTGAGAGTTTTTACGAAGATCTGCATT 199874 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || |||||||| ||||||||||||| | ||||| || ||| Sbjct 200770 AGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTACCGTCT 200711 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | || || || | | || ||||| || ||| Sbjct 200710 TCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTATCT 200651 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || | |||| | || || || |||||||| || || ||| Sbjct 200650 TGGATCTTGGCTTTCACGTTTTCTATTGTATCAGAGGCTTCAACTTCAAGGGTGATGGTT 200591 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || |||||||| || ||||||| ||||||| Sbjct 200590 TTCCCAGTGAGAGTTTTTACGAAGATCTGCATT 200558 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || || || || |||||||||||||||||||| | | |||||| || ||||| || Sbjct 201217 TGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCGTCTTCCAGTTGC 201158 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || |||||||| | | || || || | | |||||| || || || |||||||| Sbjct 201157 TTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGGATTCCCTCTTTGTCCTGAATTTTG 201098 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || | || | | |||||||| || ||||| || || || ||||| || || Sbjct 201097 GCCTTTACGTTTTCAATGGTGTCTGAAGCTTCGACTTCGAGGGTGATGGTTTTACCAGTA 201038 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 ||||| |||||||| | |||||| Sbjct 201037 AGAGTTTTCACGAAAATTTGCATT 201014 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || |||||||| ||||||||||||| | ||||| || ||| Sbjct 200542 AGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTACCGTCT 200483 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| | | || || || | | || ||||| || ||| Sbjct 200482 TCCAGCTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTGTCT 200423 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || || ||| | |||| | || || || ||||| || || || ||| Sbjct 200422 TGGATCTTGGCCTTCACATTTTCTATTGTATCAGAGGCTTCAACTTCGAGGGTGATGGTT 200363 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || |||||||| ||||| |||| |||||| Sbjct 200362 TTCCCAGTGAGAGTTTTCACAAAGATTTGCATT 200330 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| || || |||||||| ||||||||||||| | ||||| || ||| Sbjct 199858 AGAACCAGATGAAGTGTGGATTCTTTTTGAATGTTGTAATCGGAGAGTGTTCTACCGTCT 199799 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | || || |||||||| | | || || || | | || ||||| || ||| Sbjct 199798 TCCAACTGCTTACCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTATCT 199739 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||||| |||||| | || ||| || || || | || || ||| Sbjct 199738 TGGATCTTGGCTTTGACATTCTCTATAGTATCAGAAGCTTCCACCTCTAAGGTGATGGTT 199679 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||| |||| ||||| Sbjct 199678 TTCCCAGTAAGAGTTTTCACAAAGATTTGCAT 199647 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| || || ||||| || | | || || || ||||| | Sbjct 200309 CAAG-TGAAGAGTAGATTCTTTCTGAATATTGTAGTCTGAGAGTGTCCTACCGTCTTCCA 200251 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | | || || || | | || ||||| || ||||| | Sbjct 200250 ACTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTGTCTTGGA 200191 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | |||| |||| || || ||||| || || || ||||| | Sbjct 200190 TCTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTCC 200131 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | |||||||| |||||||||| ||||||| Sbjct 200130 CAGTGAGAGTTTTCACGAAGATCTGCATT 200102 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||| ||||| || || ||||| || | | || || || ||||| | Sbjct 200993 CAAG-TGAAGAGTAGATTCTTTCTGAATATTGTAGTCTGAGAGTGTCCTACCGTCTTCCA 200935 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || |||||||| | | || || || | | || ||||| || ||||| | Sbjct 200934 ACTGCTTGCCAGCGAAGATCAAACGTTGTTGATCAGGAGGAATGCCTTCTTTGTCTTGGA 200875 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | |||| |||| || || ||||| || || || ||||| | Sbjct 200874 TCTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCGAGGGTGATGGTTTTCC 200815 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | |||||||| |||||||||| ||||||| Sbjct 200814 CAGTGAGAGTTTTCACGAAGATCTGCATT 200786 >seq9895 Length=179237 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 152001 CCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCA 152060 |||||||| |||||||||||| ||| ||| | || | ||||||| ||| |||||| Sbjct 35363 CCTTCCTTGTCTTGAATTTTTGTTTTAACATTTTCAATCGTGTCTGATGCCTCAACTTCA 35422 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| ||||| ||||| |||| ||||| Sbjct 35423 AGGGTGATAGTCTTCCCCGTAAGAGTTTTCACAAAGATTTGCAT 35466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153593447183309