Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cyphomyrmex_20costatus_20[refseq_20GCF_5F001594065.1_202016-03-25]
15,379 sequences; 300,316,566 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq9873 102 8e-17
>seq9873
Length=3435365
Score = 102 bits (112), Expect = 8e-17
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|||||||| | |||||||||||| | ||||||||| || ||||| ||| ||||||
Sbjct 2563101 CCTGGCATAATTCCTCGTTTTTTCAGCCAAAATATAGCTGCAAAACTACCGCTGAAGAAA 2563042
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
||||| || ||||||||||| || || | |||| | |||||| ||| | | || |
Sbjct 2563041 ATACCTTCGACAGCCGCAAACGCGACTACACGTTCAGGAAATGTAGCACTCTCATGATTG 2562982
Query 23689 ATCCAtttttttGTCCAATTAGCCTT 23714
||||| ||| || ||||||||| ||
Sbjct 2562981 ATCCAGTTTAATGCCCAATTAGCTTT 2562956
Score = 98.7 bits (108), Expect = 1e-15
Identities = 131/181 (72%), Gaps = 1/181 (1%)
Strand=Plus/Minus
Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820
||||||| ||| | ||||| || ||||| || ||| |||||| |||||||| ||
Sbjct 2562348 TTTTCTTTTGGATCAGAAATATACGTTTCAATGAGCAAAGAATACATCTCAGAATGGATG 2562289
Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880
||||| || ||||| ||||| ||||||||||| | ||||| | | || || || | |
Sbjct 2562288 TTTTCTATTGCAATTTGAAAGCCATAAAAACAACGTGCTTCGGTAATTTTTACCTCTTGA 2562229
Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGC-AAG 23939
||||| | | | ||| || |||||||||||||| || |||||||| || |||
Sbjct 2562228 CTGAATCTCTCAATCAGATTCTCATTAACAATACCATCGGATGCGGCAAAGAATGCTAAG 2562169
Query 23940 A 23940
|
Sbjct 2562168 A 2562168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521387750450600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |