Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq890 185 1e-41
seq743 134 2e-26
>seq890
Length=125401
Score = 185 bits (204), Expect = 1e-41
Identities = 221/296 (75%), Gaps = 3/296 (1%)
Strand=Plus/Plus
Query 145652 AGGGCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGG-GCTCCACGTGGTTGAGGTAGAC 145709
|||| | ||||||| | |||||||| || ||| | | |||| ||||| || || |
Sbjct 47099 AGGGGCAGGGGCTCGCGCGTCAGCTGAAG-TTCGGCCTGTTCCAGATGGTTCAGATACAG 47157
Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769
||| ||||| || | | |||| ||| || || ||||| || ||| || ||||| ||
Sbjct 47158 GTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCTCCAGACCCACGACCTGGGCCAC 47217
Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829
||| ||||||||||| |||| ||| |||||||| ||||| ||||| ||||| |
Sbjct 47218 CATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGC 47277
Query 145830 CGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAG 145889
||||| |||||||||||| ||| | ||| | || ||| |||||||| |||||
Sbjct 47278 GCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTGCGACGAAGAACTGGAACAGGCA 47337
Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945
|||||| ||||||||||||||| || || ||||||||||||||||||| ||| ||
Sbjct 47338 GTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCCGGGTTCCAGGCGCTGACGA 47393
>seq743
Length=263205
Score = 134 bits (148), Expect = 2e-26
Identities = 190/267 (71%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCT 145747
|||||| |||||| || | |||||||| || || ||||||||| || || |||
Sbjct 72898 GCTCCAGATGGTTGGAATACAGATGCGCGTCGCCGAGCGTGTGGATGAAATCGCCCGGCG 72957
Query 145748 CGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGG 145807
| || |||| | || |||| ||| |||||||| | ||| || |||||||| |
Sbjct 72958 CAAGATCCGTCACCTGTGCGATCATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACG 73017
Query 145808 GCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG 145867
|||| || || || ||| |||| ||||| || |||||||| ||||| | ||| ||
Sbjct 73018 GCACGCCGAGAAACACGTCGGCCGAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCG 73077
Query 145868 CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927
| |||||||||||| ||||| ||||| |||||||| |||||| | || ||||
Sbjct 73078 CGACGTAGAACTGGAACAGGCAATGGCATGGCGGCAGCGCCATGTGATCGACATCGGCCG 73137
Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCC 145954
| ||||| ||| ||| || |||| ||
Sbjct 73138 GATTCCATGCGCTGACGATCAGCCGCC 73164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590065743435960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |