Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq890 185 1e-41 seq743 134 2e-26 >seq890 Length=125401 Score = 185 bits (204), Expect = 1e-41 Identities = 221/296 (75%), Gaps = 3/296 (1%) Strand=Plus/Plus Query 145652 AGGGCCGGGGGCTCCTG-GTCAGCTGGAGCTTCAGGG-GCTCCACGTGGTTGAGGTAGAC 145709 |||| | ||||||| | |||||||| || ||| | | |||| ||||| || || | Sbjct 47099 AGGGGCAGGGGCTCGCGCGTCAGCTGAAG-TTCGGCCTGTTCCAGATGGTTCAGATACAG 47157 Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 ||| ||||| || | | |||| ||| || || ||||| || ||| || ||||| || Sbjct 47158 GTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCTCCAGACCCACGACCTGGGCCAC 47217 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||| ||||||||||| |||| ||| |||||||| ||||| ||||| ||||| | Sbjct 47218 CATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGC 47277 Query 145830 CGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAG 145889 ||||| |||||||||||| ||| | ||| | || ||| |||||||| ||||| Sbjct 47278 GCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTGCGACGAAGAACTGGAACAGGCA 47337 Query 145890 GTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945 |||||| ||||||||||||||| || || ||||||||||||||||||| ||| || Sbjct 47338 GTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCCGGGTTCCAGGCGCTGACGA 47393 >seq743 Length=263205 Score = 134 bits (148), Expect = 2e-26 Identities = 190/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCT 145747 |||||| |||||| || | |||||||| || || ||||||||| || || ||| Sbjct 72898 GCTCCAGATGGTTGGAATACAGATGCGCGTCGCCGAGCGTGTGGATGAAATCGCCCGGCG 72957 Query 145748 CGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGG 145807 | || |||| | || |||| ||| |||||||| | ||| || |||||||| | Sbjct 72958 CAAGATCCGTCACCTGTGCGATCATCATCGTCAGCAGCGCATAGGACGCGATGTTGAACG 73017 Query 145808 GCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCG 145867 |||| || || || ||| |||| ||||| || |||||||| ||||| | ||| || Sbjct 73018 GCACGCCGAGAAACACGTCGGCCGAACGCTGATAGAGCTGGCACGAGAGTTTGCCGTTCG 73077 Query 145868 CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 | |||||||||||| ||||| ||||| |||||||| |||||| | || |||| Sbjct 73078 CGACGTAGAACTGGAACAGGCAATGGCATGGCGGCAGCGCCATGTGATCGACATCGGCCG 73137 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCC 145954 | ||||| ||| ||| || |||| || Sbjct 73138 GATTCCATGCGCTGACGATCAGCCGCC 73164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590065743435960