Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1121 87.8 3e-12
>seq1121
Length=1158
Score = 87.8 bits (96), Expect = 3e-12
Identities = 171/253 (68%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 205385 GATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAG 205444
||||| ||| ||||| |||| ||| | | ||||||||||||| | | | | |
Sbjct 1158 GATTACTATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAGCCAC 1099
Query 205445 TTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTA 205504
|| ||||| | ||| || ||||| |||| ||||| |||||| || || ||||
Sbjct 1098 ATATTTGTGCTAACATTATTGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTA 1039
Query 205505 AACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACAT 205564
|| ||||| || | |||||| | |||||| | | | ||||| || | || |
Sbjct 1038 AAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGT 979
Query 205565 GAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCC 205624
|||||| | ||| |||||| ||||||| ||||||||| || ||| |||||| |
Sbjct 978 AAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTC 919
Query 205625 AGGCTGTTAATAT 205637
| ||| ||| ||
Sbjct 918 ATACTGATAAAAT 906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755441844643200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |