Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1121 87.8 3e-12 >seq1121 Length=1158 Score = 87.8 bits (96), Expect = 3e-12 Identities = 171/253 (68%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 205385 GATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTTAAATTAG 205444 ||||| ||| ||||| |||| ||| | | ||||||||||||| | | | | | Sbjct 1158 GATTACTATAAATATGAGCATCACCTAAAGTATGAATAAATTCTCCTAGCTGATAGCCAC 1099 Query 205445 TTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGGTACACCTA 205504 || ||||| | ||| || ||||| |||| ||||| |||||| || || |||| Sbjct 1098 ATATTTGTGCTAACATTATTGTTAATAATGCATAAGAAGCAATATTAAAAGGAACTCCTA 1039 Query 205505 AACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTATTAATTACAT 205564 || ||||| || | |||||| | |||||| | | | ||||| || | || | Sbjct 1038 AAAAAATATCTGCACTACGTTGATATAATTGACAAGATAATTTTTTATCATCAGAAACGT 979 Query 205565 GAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGATTCC 205624 |||||| | ||| |||||| ||||||| ||||||||| || ||| |||||| | Sbjct 978 AAAATTGAATTAAAGTATGACATGGTGGTAGTGCCATATTTTTAATTTCTGCAGGATTTC 919 Query 205625 AGGCTGTTAATAT 205637 | ||| ||| || Sbjct 918 ATACTGATAAAAT 906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755441844643200