Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq20 93.3 6e-14
>seq20
Length=12842
Score = 93.3 bits (102), Expect = 6e-14
Identities = 169/246 (69%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 35882 CTGATTCAAATGATATAtttttttGTTGAAGAAAAGAATGAAAACCCAAAACACCAATTC 35941
|||||||||| | | |||| ||| | ||| ||||||||||||| || |||| |
Sbjct 6922 CTGATTCAAAAGGAACCATTTTACTTTGTAAAAATGAATGAAAACCCATCACGCCAAGAC 6981
Query 35942 CTATACTTCTTTCCTTTTTTGCCGAGTTCACCGCACGAGATAT---AGTTGGAGGTGCCT 35998
| ||||| | || || |||| || | || || ||| | |||| ||| |
Sbjct 6982 CGATACTACGCTCTCTTATTGCGGAATATTTTGCTCGCTGTATTTCATTTGG---TGCTT 7038
Query 35999 TTTCTATAAAAATTGTTAAAGCATTATCCAACATTTCCATTACATCTTTTATAAAAAGAT 36058
| ||| ||| ||| ||||||| | | ||||| ||||| ||| ||||| |
Sbjct 7039 GGTTTATGAAATCCTCTAATACATTATCAAGAAAACGCATTATATCTTCTATGAAAAGCT 7098
Query 36059 CGTTATCTTTCCATTCATCATAATATTCTAAATTTAAAGAAGATAAACAACAGACAGCTG 36118
| |||||||||||||| || || ||||| | ||||| || ||||||||||| ||||| |
Sbjct 7099 CATTATCTTTCCATTCTTCGTAGTATTCAAGATTTACGGATGATAAACAACATACAGCAG 7158
Query 36119 TTCGTG 36124
| ||||
Sbjct 7159 TGCGTG 7164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679801661977680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |