Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq890 102 7e-17 >seq890 Length=125401 Score = 102 bits (112), Expect = 7e-17 Identities = 171/247 (69%), Gaps = 3/247 (1%) Strand=Plus/Plus Query 20951 GTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGAT 21010 ||||||||| || ||||| || || || || ||||| ||| ||| ||| || || | Sbjct 47158 GTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCTCCAGACCCACGACCTGGGCCAC 47217 Query 21011 CAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGC 21070 || ||||| ||||||||| ||||||||| ||||| || || ||| |||||||| Sbjct 47218 CATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACGCCCAGGAAGATGTCGGC 47277 Query 21071 GGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAAC 21130 | | ||| |||||||||||| || | || || ||| | ||||| ||| Sbjct 47278 GCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTGCGACGAAGAACTGGAACAGGCA 47337 Query 21131 GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGAT 21190 ||| || || || || ||||| | | |||||| |||||||| |||| | ||||| Sbjct 47338 GTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCCGGGTTCCAGGCGC---TGACGAT 47394 Query 21191 GCGCCGA 21197 | | ||| Sbjct 47395 GTGGCGA 47401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427768184933520