Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq931 316 1e-81
seq998 262 2e-65
seq1095 260 7e-65
seq743 89.7 2e-13
>seq931
Length=105225
Score = 316 bits (350), Expect = 1e-81
Identities = 531/762 (70%), Gaps = 7/762 (1%)
Strand=Plus/Minus
Query 66692 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 66750
|||||||| | | ||||||| || ||||||||||| || | || | |||| ||||
Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314
Query 66751 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 66810
| | || | | |||||| ||||| || || ||| | || ||| || ||| |||||||
Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254
Query 66811 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 66870
| | |||||| || ||| |||||||| | | ||||| || ||| | ||||||||
Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194
Query 66871 CGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 66930
|| || ||| || ||| || || | || || | || ||||| ||||| |||||
Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134
Query 66931 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 66990
||||||||||| ||||||||||| ||| || || || |||| || ||||||
Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074
Query 66991 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 67050
|| || ||||| || || |||||| |||||||| || |||||||||| || || ||
Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014
Query 67051 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCAC 67110
||| | || || || || || || ||| ||||| |||||||||| || | | |
Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954
Query 67111 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 67169
||||||| | || | || | || | |||||||| | || | |||||||||
Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895
Query 67170 ACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCT 67229
| || ||||| || || ||||| |||||||| || || ||| |||||||||||
Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838
Query 67230 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 67289
| || || |||| |||| |||| || | | ||| | ||||||||| |||||||
Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778
Query 67290 ACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 67349
|| |||||| || || || |||||||||||| | ||||||||| |||| | | | |
Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718
Query 67350 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 67409
|| | || ||||||| || |||||||| || ||| || ||||||||| |||
Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658
Query 67410 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 67451
| |||| || | ||||| ||||| |||||||| ||||
Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616
>seq998
Length=1052685
Score = 262 bits (290), Expect = 2e-65
Identities = 510/750 (68%), Gaps = 5/750 (1%)
Strand=Plus/Plus
Query 66695 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 66754
||||| ||| || ||| ||| || ||| |||| ||| |||| ||||||||||||
Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365
Query 66755 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 66814
|| || ||||| || ||||| || || ||| | || ||| || || |||||||| |
Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425
Query 66815 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAG 66874
|| |||||| || |||| | |||| ||||||||| || || | |||||||| |
Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485
Query 66875 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66934
|| ||| |||||| || | |||| | || || | ||||| ||| ||||
Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545
Query 66935 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 66994
|| ||||| || ||||||| || || || || |||| | || | | | ||
Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605
Query 66995 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 67054
|| || || || || || || |||||||||||||| ||||| || || || || |||
Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665
Query 67055 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATC 67114
| || |||| |||||| | ||| ||||| |||||||||| || | | |||
Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725
Query 67115 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 67174
|| || |||| || | ||| |||||||| | ||| ||||||||| |||
Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782
Query 67175 GGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTC 67234
|||||| || || ||||| |||||||| || || ||| ||||| ||||| |||
Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842
Query 67235 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 67294
||| | || | || ||||||| | | ||||| |||| |||| |||||||| |
Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902
Query 67295 ACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 67354
||||| || || || || ||||||||||| || |||||| | | | ||| ||| |
Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962
Query 67355 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 67413
|| ||||||| ||||| |||| | || || ||| ||||||| || | ||| |
Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021
Query 67414 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 67443
||| | || ||||||| |||||||||||
Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051
>seq1095
Length=1089284
Score = 260 bits (288), Expect = 7e-65
Identities = 503/739 (68%), Gaps = 5/739 (1%)
Strand=Plus/Minus
Query 66707 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 66766
|||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| |||||
Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708
Query 66767 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 66826
|| ||||| || || ||| | || ||| || || ||||| | || ||||||
Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648
Query 66827 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCG 66886
|| |||| ||||| |||||| || || ||| | || || || | || ||| |
Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588
Query 66887 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 66946
||||| || | ||||| | || || | ||||| ||| ||| |||||||| |||
Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528
Query 66947 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 67006
|| || | || || || || |||| | || | | | || | || || |||
Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468
Query 67007 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 67065
|| || |||||||| |||||||| ||||||||||| || || || || | |||| |
Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409
Query 67066 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA 67125
||| || || || ||| ||||| |||||||||| || | | | ||| || ||||
Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349
Query 67126 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 67185
||| || | | | |||||||| | ||| ||||||||| ||| || ||| |
Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292
Query 67186 GAATGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 67245
| || |||||||| ||||| || || ||| ||||||||| || || || | || |
Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232
Query 67246 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 67305
||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || ||
Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172
Query 67306 AGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 67365
|| || |||||||||||||| |||||| | | | ||| ||| | || |||||||
Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112
Query 67366 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 67425
||||| | ||| || |||| |||||||||| | ||| | ||| | || |
Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052
Query 67426 GAAGTCGGGCGCCTGGTTC 67444
||||||||||||||||||
Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033
>seq743
Length=263205
Score = 89.7 bits (98), Expect = 2e-13
Identities = 183/265 (69%), Gaps = 8/265 (3%)
Strand=Plus/Minus
Query 59997 GGATTCATGGGCAAGAAGTGGG--ACGGCTCAGGCATCGCTTTCGATGTCGAGATGTGGG 60054
||||||||||||||| | |||| |||| ||| |||| ||| | || | |||
Sbjct 30995 GGATTCATGGGCAAGCAATGGGACACGGGCGAGG--TCGCCTTCTCGGAAGAATTCTGGT 30938
Query 60055 AGCAATGCCTGCGGGTCCTCAAGCCCGGTGGGCACCT-GCTCGCCTTCGGCGGCTCCCGC 60113
|| |||||| || || || || || |||||| | ||| || ||||||| || |||
Sbjct 30937 CCGAAGTCCTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCGC 30879
Query 60114 ACCTGGCACCGGCTGACCGTG-GCCATCGAGGACGCGGGCTTCGAGATTCGTGACTCCAT 60172
|| ||||| || |||| || ||||| || ||||| || || || || ||||| |
Sbjct 30878 GGCTATCACCGCATG-GCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCT 30820
Query 60173 CGCCTGGCTGTACGGCAGCGGGTTCCCCAAGTCGCTCGACGTATCCAAGGCCATTGACAA 60232
| ||| | || || | ||||| || ||||||| || || ||||| ||||| ||
Sbjct 30819 CATGTGGATTTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAA 30760
Query 60233 GGCTGCTGGTGCTGAGCGCGAGGTG 60257
|| || ||||| || || ||||||
Sbjct 30759 AGCGGCGGGTGCGGAACGTGAGGTG 30735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242849963277788
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