Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_004687.1 Length=156102 Score E Sequences producing significant alignments: (Bits) Value seq1155 93.3 4e-14 seq763 82.4 8e-11 >seq1155 Length=1012 Score = 93.3 bits (102), Expect = 4e-14 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 94068 CACCA-CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGG 94126 ||||| |||| ||| | |||| |||| |||||||| ||||||||||| ||| |||||||| Sbjct 433 CACCATCGGGATGTGGCTCAGCTTGGTAGAGCGCTCGGTTTGGGACCGAGAGGTCGCAGG 492 Query 94127 TTCGAATCCTGTCACCCCGAC 94147 ||||||||||||| |||||| Sbjct 493 TTCGAATCCTGTCTTCCCGAC 513 >seq763 Length=251843 Score = 82.4 bits (90), Expect = 8e-11 Identities = 108/147 (73%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 116617 GCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCGA 116676 ||| |||||| || || |||| |||| ||| ||| || ||||||||||||| | Sbjct 12332 GCCAGGGCCGGGGATCGGCCGCCAACTCGGCCGTCTGCTATGTGCTGGGCATCACCTCCA 12273 Query 116677 TCGACCC-GATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGCCCCGAC 116735 ||||||| || | ||||||| ||||||||||||| || | ||| |||| ||| Sbjct 12272 TCGACCCTGAACGCA-ACGACCTCCTGTTCGAGCGCTTCGTCTCCGAGGAGCGCCGCGAA 12214 Query 116736 TTCCCCGACATCGACGTCGACTTCCAG 116762 ||||||||||||||||| ||| || Sbjct 12213 CCGCCCGACATCGACGTCGATTTCGAG 12187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499389042522480