Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq1095 181 3e-41 >seq1095 Length=1089284 Score = 181 bits (200), Expect = 3e-41 Identities = 355/506 (70%), Gaps = 24/506 (5%) Strand=Plus/Minus Query 34031 GCCTACTACAACGAAATCGACCAATTTGCAGCTCAATGGCTGCGTAACCTGATCGCCGGC 34090 || |||||||||||| | || | || ||||| || ||||| || ||||| ||||| | | Sbjct 151506 GCGTACTACAACGAATTTGATCCGTTCGCAGCGCAGTGGCTCCGAAACCTCATCGCTGCC 151447 Query 34091 GGTCATATCGCGCCAGGCGAAGTTGACGAAAGGAGTATTGAAGATGTCACACCTGACGAC 34150 || | |||||||||||||| |||||||| | || || | ||||||| || |||||| Sbjct 151446 GGGCTCATCGCGCCAGGCGACGTTGACGAGCGAAGCATCGTCGATGTCAGGCCCGACGAC 151387 Query 34151 CTGCGAGGTTTTACGCAGTGCCACTTCTTCGCCGGAATTGGCGTCTGGTCTCATTCCCTG 34210 ||||||| | ||||| || ||||||||||| ||||||| ||| | || || Sbjct 151386 GTGCGAGGCTACACGCAAGCGCATTTCTTCGCCGGGATTGGCGGATGGAGCTACGCCTTG 151327 Query 34211 CGCCTCGCCGGATGGCCAGATGATAAAACAGTCTGGACCGGCTCCTGCCCGTGCCAGC-- 34268 || ||||| |||||||| |||||| | |||||||| ||||| || || |||| Sbjct 151326 CGGCTCGCAGGATGGCCGGATGATCGCGAATGTTGGACCGGATCCTGTCCCTGTCAGCCG 151267 Query 34269 CTTTC-AGCGC-GGCAGGCAAAGGAGATGGGTTTGCTGACGAGCGGCACCTTTGGCCACA 34326 ||||| |||| || |||| | | ||| || ||||| | ||||| ||||| | Sbjct 151266 CTTTCGGGCGCGGGAAGGC----GCAAGGGGCACGCCGACGATAGACACCTGTGGCC-CG 151212 Query 34327 CTTCTTCCA-CCTCATCAGCGAGCGC-AGACCTCAGCAT-GTCTTTGGCGAACAGGTTGC 34383 ||| | || ||||||| ||| || | | ||| || |||||||| || |||||||| Sbjct 151211 CTTTTCACAGCCTCATCGCCGACTGCTCGCCTTCA--ATCGTCTTTGGAGAGCAGGTTGC 151154 Query 34384 -AGCAGGTAACGCAAACACATGGTTCGACCTTGTACAAGCAGACCTGGAAGGAGTGGGAT 34442 |||| | ||| | |||| ||| | ||| || |||||||||| |||||| Sbjct 151153 GAGCAAG-GACGGACGTGAATGGCTCGCCGGAATACGTGCTGACCTGGAAGACCTGGGAT 151095 Query 34443 ACACCTTCGGGCTTGTGCCGTTC---ACGTCAGCGGGCATCGGTGCGCCGCACATCAGAG 34499 | ||| |||| ||||| || || | |||||| |||| ||||| ||| || Sbjct 151094 ATGCCTGCGGG--ACTGCCGATCTGTGCG-CTGCGGGCGTCGGCGCGCCACACCCTAGGC 151038 Query 34500 AGCGAGCT-TACTGGGTGGCCCACGC 34524 |||| ||| || ||| ||||| |||| Sbjct 151037 AGCG-GCTGTATTGGTTGGCCGACGC 151013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126823342425054