Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_004902.1 Length=44373 Score E Sequences producing significant alignments: (Bits) Value seq97 118 3e-22 >seq97 Length=479585 Score = 118 bits (130), Expect = 3e-22 Identities = 289/437 (66%), Gaps = 12/437 (3%) Strand=Plus/Minus Query 6117 CTGCTGGGTCTGATCCCGCAGGCTACCACCTATGCTGCTCCG------ACCACCATTGCT 6170 ||||| || | ||||||||||| || ||| ||| | ||| || ||||| | Sbjct 247587 CTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCCC 247528 Query 6171 GGTGCT---ACCCGTGTCGATCAGCTGCGTCTTGCGATGTTGCAGGCAAGCCTGGCCGAG 6227 | || ||| || | || | || ||| | |||||| | ||||| ||||| || Sbjct 247527 GCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGAA 247468 Query 6228 TATCCGGCTAGCGGCATTGTGATCAACCCGATTGACTGGGCGGCGATTGAGCTCGCCAAG 6287 |||||||| | || || ||| ||||||||||||| | |||| || ||| ||| Sbjct 247467 TATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAG 247408 Query 6288 GATGCGAACAACCAGTACCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTGG 6347 || | | || ||| | || ||||| | | || || | | |||||||| ||| Sbjct 247407 GACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGG 247348 Query 6348 GGTCTGCCGGTGGTTGCCACCCAGGCTATGGCTCCGGGCGAATTCCTGGTTGGTGCATTC 6407 ||||||||||| || | |||||||| ||||| | ||| | ||||| ||||||||| Sbjct 247347 GGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATTC 247288 Query 6408 GACTTGGCTGCCCAGATCTTTGATCAGTGGGACGCACGGGTGGAAATCG---GCTATGTA 6464 | ||| ||| ||||| || || | ||| | || || || ||| ||| | | Sbjct 247287 AAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAAC 247228 Query 6465 AATGACGACTTCCAGCGCAACATGGTGACGGTCCTGGCGGAAGAGCGCCTGGCCCTGGTT 6524 | ||||||||| ||| | || || |||| || |||||||| || || |||| Sbjct 247227 GAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGCC 247168 Query 6525 GTGTACCGTCCGGAAGC 6541 || || ||||| ||||| Sbjct 247167 GTCTATCGTCCAGAAGC 247151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141869474589730