Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_004902.1
Length=44373
Score E
Sequences producing significant alignments: (Bits) Value
seq97 118 3e-22
>seq97
Length=479585
Score = 118 bits (130), Expect = 3e-22
Identities = 289/437 (66%), Gaps = 12/437 (3%)
Strand=Plus/Minus
Query 6117 CTGCTGGGTCTGATCCCGCAGGCTACCACCTATGCTGCTCCG------ACCACCATTGCT 6170
||||| || | ||||||||||| || ||| ||| | ||| || ||||| |
Sbjct 247587 CTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCCC 247528
Query 6171 GGTGCT---ACCCGTGTCGATCAGCTGCGTCTTGCGATGTTGCAGGCAAGCCTGGCCGAG 6227
| || ||| || | || | || ||| | |||||| | ||||| ||||| ||
Sbjct 247527 GCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGAA 247468
Query 6228 TATCCGGCTAGCGGCATTGTGATCAACCCGATTGACTGGGCGGCGATTGAGCTCGCCAAG 6287
|||||||| | || || ||| ||||||||||||| | |||| || ||| |||
Sbjct 247467 TATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAG 247408
Query 6288 GATGCGAACAACCAGTACCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTGG 6347
|| | | || ||| | || ||||| | | || || | | |||||||| |||
Sbjct 247407 GACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGG 247348
Query 6348 GGTCTGCCGGTGGTTGCCACCCAGGCTATGGCTCCGGGCGAATTCCTGGTTGGTGCATTC 6407
||||||||||| || | |||||||| ||||| | ||| | ||||| |||||||||
Sbjct 247347 GGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATTC 247288
Query 6408 GACTTGGCTGCCCAGATCTTTGATCAGTGGGACGCACGGGTGGAAATCG---GCTATGTA 6464
| ||| ||| ||||| || || | ||| | || || || ||| ||| | |
Sbjct 247287 AAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAAC 247228
Query 6465 AATGACGACTTCCAGCGCAACATGGTGACGGTCCTGGCGGAAGAGCGCCTGGCCCTGGTT 6524
| ||||||||| ||| | || || |||| || |||||||| || || ||||
Sbjct 247227 GAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGCC 247168
Query 6525 GTGTACCGTCCGGAAGC 6541
|| || ||||| |||||
Sbjct 247167 GTCTATCGTCCAGAAGC 247151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141869474589730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |