Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq1134 403 7e-108 seq1495 246 1e-60 seq838 138 5e-28 >seq1134 Length=45677 Score = 403 bits (446), Expect = 7e-108 Identities = 1412/2147 (66%), Gaps = 110/2147 (5%) Strand=Plus/Plus Query 54819 CGTCGACGCCGAGGCGACCGAGAAGGCCAACGACGTCGC-GCAGAAGATGCGCGCGGCGT 54877 ||||||| |||||||| | |||| |||| || ||| ||||| | |||| Sbjct 3828 CGTCGACACCGAGGCGGC---GAAGACCAA-------GCTGCAAAAGATCAAGGATGCGT 3877 Query 54878 TTAGCCGATGGATTTGGACCGACACGCAGCGCGCCGACCGGCTCGTCAACTACTACAACG 54937 | || ||||| ||| |||| | | ||| |||||||||| | | |||||||| Sbjct 3878 TCCAGCGCTGGATCTGGTCCGATCCCGACCGCACCGACCGGCTGGCGCGCGTCTACAACG 3937 Query 54938 AGAACTTCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCG 54997 | |||||||||||||||||| || |||||||||||||| |||| ||| ||||||| Sbjct 3938 ACCGCTTCAACAACATCGCGCCACGGGCCTTCGACGGCTCGCATCTGAAGCTTCCGGGCG 3997 Query 54998 TGTCGCTGCGC-TTCAACCTGCGCGAAAACCAGAAGCGCGCCATCTGGCGCGGCATTCAG 55056 || | |||| || ||| | |||||||||||| |||||||||| || | Sbjct 3998 CCTCTC-GCGCCTTTGTCCTTTATGGGCACCAGAAGCGCGGCATCTGGCGCATTATCTCG 4056 Query 55057 GAAGG--CGACATGTACCTCGCGCACGCGGTCGGCGCGGGCAAGACGTTCACGATGATCG 55114 | || |||| | ||||||||||||| |||||||| |||||||| | |||||| || Sbjct 4057 GCCGGTTCGACCT--ACCTCGCGCACGCCGTCGGCGCCGGCAAGACCATGACGATGGCCG 4114 Query 55115 CGACGGGCATGGAGGAGCGCCGGCTGGGCCTCTCCAACAAGCCGATGTACGTGGTGCCGA 55174 | | | ||||||| |||||||||| ||||| | |||| ||||| ||| ||||| Sbjct 4115 CCGCCGTCATGGAGCAGCGCCGGCTCGGCCTGATCGCCAAGGCGATGCTCGTCGTGCCCG 4174 Query 55175 ACCACATGCTCGCGCAGTTCGCACGCGAATTCCTCGAGCTCTACCCGGCCGCGAACATCA 55234 ||| || |||||| || ||||||||||| | |||||||||| ||||| ||| Sbjct 4175 GCCATTGCCTGGCGCAGGCGGCGCGCGAATTCCTGGCGCTCTACCCGAACGCGAGGATCC 4234 Query 55235 TGGTCGCGGACGAGCAGAATTTCCACACGCACAACCGCCGTCGCTTC--GTCGCGCAGGC 55292 | ||||| |||||| ||| ||| || | |||| || | |||||| ||| ||| || Sbjct 4235 TCGTCGCCGACGAGACGAACTTCACCAAGGACAAGCGGCACCGCTTCCTGTCACGC--GC 4292 Query 55293 CGCGCTCAACAATCCGGATGCGGTCATCATCACGCACTCGGCGTTCGGCCGCATCGGCAT 55352 ||| | | ||| ||| ||||||| ||||| ||||| ||| || |||| || | Sbjct 4293 GGCGACCGCGACCTGGGACGCGATCATCATTACGCATTCGGCCTTCCGCTTCATCAGCGT 4352 Query 55353 GTCCGAC-GAGTACGCGGCGCAGTTCATCTCCGACCAGATCGACGAGTGGAAAGCCGC-G 55410 | ||| | | || || | || | ||| ||| || |||| | || ||| | Sbjct 4353 G-CCGTCGGCGTTCGAGAGCCAAATGATCCAGGACGAGCTCGA-GCTCTACGAGACGCTG 4410 Query 55411 CTCGACGAGACGGACAAGAG---CGACCGGATCACGCGCAAGCAGATCGAGCGCCGCATC 55467 || ||| || || | |||| |||||| | ||||||||| | ||||||| | || Sbjct 4411 CT-GAC--GAAGGTCGAGAGCGACGACCGCGTTTCGCGCAAGCGGCTCGAGCGGCTCAAG 4467 Query 55468 GNNNNNNNNNNNNNNNNNNNNNNNGCGAAACAGGGCAGCGAGAAGAAGGACAAGGTGCTG 55527 | ||| | | | ||| ||||| | | ||| Sbjct 4468 GAAGGCCTGAAAGAGAGGCTGGAGGCG-CTCTCGAC-GCG----CAAGGATGACCTCCTG 4521 Query 55528 TCGTTCGAGGAGCTGGGCGTCGACCGTCTGTTCGTCGACGAATTCCACGAGTTCCGCAAA 55587 | || ||| | |||||||||| | |||||||||| || ||||||||||| Sbjct 4522 ACCATCTCCGAGATCGGCGTCGACCAGATCATCGTCGACGAGGCGCAGGAGTTCCGCAAG 4581 Query 55588 CTCGACTTCGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCCGGCTCGCAGCGC 55647 ||| ||| || ||| | ||||| | | |||||| |||||||| ||||||||||||| Sbjct 4582 CTCTCCTTTGCCACGAATATGAGCACCTTGAAGGGCGTCGACCCGAACGGCTCGCAGCGC 4641 Query 55648 GCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTC 55707 || |||||| ||| | ||| | ||| | || ||||| ||||||||||||||| Sbjct 4642 GCCTGGGACCTTTTCGTCAAGTCGCGTTACGTCGACATGAAGAACCCGGGCCGCGCGCTC 4701 Query 55708 GTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCGCAACGC 55767 ||| ||| |||||||| ||| |||| |||||| |||||||| | | | | | ||| ||| Sbjct 4702 GTGCTCGCCTCCGGCACCCCGATCACCAACACGCTGGGCGAGATGTTCTCTGTGCAGCGC 4761 Query 55768 TTCTTCCAGCCCGAGCAGCTTGCA--GAGGATGGTCTGGATACGTTCGACGCGTGGGC-- 55823 | | || | | ||||| || ||| ||| ||| | |||||| || ||||| Sbjct 4762 TACCTC--GGCTACGCAGCACTCAGCGAGCGTGGCCTGCACGAGTTCGATGCCTGGGCAT 4819 Query 55824 CAACCAGTACGGCGACAT--CGTTGCGGGCTTCGAGCAGAACGCCG-CCGGCGGCTACGA 55880 | ||| | ||||||| | || || || |||| | | |||| | ||| ||| | Sbjct 4820 CGACC--TTCGGCGACGTGACG-ACCGAGC-TCGAAC-TACAGCCGTCGGGCAAATACAA 4874 Query 55881 GGTCGTGAGCCGCTTCGCGAAGTTCCAGAACGTGCCCGAGCTGAT-GCGCCGCGTGCGCT 55939 | || | |||||||||| ||| ||||||||||||||||| ||| | | |||| Sbjct 4875 GCCGGTCACGCGCTTCGCGACCTTCGTCAACGTGCCCGAGCTGATCGCGATG-TTCCGCT 4933 Query 55940 CGTTCATGGACATCCTGACGAGCCAACAGCT-CGCGCAGTACGTCGACCGTCCGGCGATC 55998 | ||| |||| || | | | | | || ||| || |||||| | ||||||||| Sbjct 4934 CCTTCGCGGACGTCGTCTTGCCCGAGGACCTGCGC-CAATACGTCAAGGTCCCGGCGATC 4992 Query 55999 GAGGGCGGCGGCCGTCAGATCATGGTCACGCCGGAGCCGT--TCGGC-TACAAGGCATAC 56055 | |||| || |||||| |||| || |||||| |||| | |||| ||| Sbjct 4993 TCGACCGGCAAGCGGCAGATC---CTCACCGCGAAGCCGTCGGCGGCGTTCAAGCGCTAC 5049 Query 56056 CAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGCCCGCCGCAGAAG 56115 |||| | ||||| ||||||||| |||||| | ||| | | ||||| || Sbjct 5050 CAGACGCTGCTCGGCGAGCGCATCAAGGCGATCGAGGAACGCGACCGTGCGCCGGAGCCC 5109 Query 56116 GGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCGGCGATCGACATGCGT 56175 || | ||||| || || || ||| | |||||||| ||||||| || |||| Sbjct 5110 GGTGACGACATTCTCTTGTCGGTTATCACCGACGGCCGGCATGCGGCGATTGATCTGCGG 5169 Query 56176 TTCGTCGACCCGACCGCGCCGAGCGACCCGAACAGCAAGCTGAACCAGATGATCG---AC 56232 | ||||||||| | | ||| | ||| ||||||||||||| | ||| || Sbjct 5170 CTGGTCGACCCGGACAATGATAACGAAGCCGACAACAAGCTGAACCAGCTCGTCGGCAAC 5229 Query 56233 GCCGT---GATC---GCCGACTACCATGCGGCATCCGACTACCAGTACACGACGAACGGC 56286 ||| | ||| |||| ||| || | | ||| || | | || ||||| Sbjct 5230 GCCTTCCGCATCTGGAGCGAC-ACC--GCCGAGAGCACCTA--TGTCCGCTCCG-ACGGC 5283 Query 56287 AA---GGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTCACGGACATCGGGCTCGGC 56343 || | |||| | | |||||| |||| || |||||| | || || ||| || Sbjct 5284 AAGCCGTTCGAATTGCCC---GGCGCGGCGCAGATGATCTTCTCCGATCTC-GGCACGAT 5339 Query 56344 GAGCAGTCGGCGAAGAACCGCGGCTTCGACATGAAGGCGTGGAT-CGAAAAGCGTCTGGT 56402 ||| ||| | |||| ||||||||| | | ||||| || | | | ||||| Sbjct 5340 CAGC-GTC-GAGAAGTCGCGCGGCTTCTCCGCCTATCGCTGGATCCGCGACGAG-CTGGT 5396 Query 56403 CGAGGGCGGCGTGCCCCGCG-AGCAGATCGCGTTCATGCGCGA---CAACAAGGAGCACG 56458 | |||||| || ||| | ||||| ||||||| || ||| ||| | | | Sbjct 5397 CCGCATGGGCGTG-CCGGCGTCTGAAATCGCCTTCATGCAGGACTTCAAAAAGTCGGAGG 5455 Query 56459 CGAAGAAAGAGCGTCTTTTCGCCGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGC- 56517 ||||| |||| || |||| |||| |||||| ||||| ||| | ||||||||| Sbjct 5456 CGAAG---CAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTCCGCTTCCTGATCGGCT 5512 Query 56518 --GGCAAGGACATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACAGCG-AGGAGCAT 56574 | | ||||| |||||||| || | |||| |||||| | ||| | | || Sbjct 5513 CGTCCGACACCATGGGCACCGGCGTTAATGCGCAGCTGCGCCT-GAAGGCGCTGCACCAC 5571 Query 56575 CTGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGGCGCATCATCCGCCAG 56634 || |||| ||| ||| | ||| | |||||||||||||||| |||||| | |||||| Sbjct 5572 CTCGACGTGCCCTGGCTGCCGTCGCAGATCGAGCAGCGCGAGGGCCGCATCGTGCGCCAG 5631 Query 56635 GGCAACCAGAACAAGCAGGTGCGCATCCGCGCGTGGGCGACGAAGGGC-AGCTACGACTC 56693 ||||| ||| || | |||| |||| ||| | || ||| ||||| ||| |||| | Sbjct 5632 GGCAATCAGCACGACGAGGTCGACATCTTCGCCTACGCCACGGAGGGCTCGCT-CGACGC 5690 Query 56694 GACCATGTGGGGGATGAACGCCCGCAAGGCTCGCTTCATCGAACAGGCCCTCAACGGCGA 56753 | |||||| || || | |||||||| |||||||||| ||| || ||||| Sbjct 5691 GCAGATGTGGCAGAACAATGAGCGCAAGGCCCGCTTCATCGCCGCGGCGCTGTCTGGCGA 5750 Query 56754 CGACAGCG-TGCGCTCGCTGGAGGACGTGTCCGAGGCGTCGGC------GTTCGACATGG 56806 | || || | ||| || |||||| || |||| ||| ||||| |||| Sbjct 5751 C-ACCTCGATCCGCCGTCTCGAGGACATGGGCGAGAGCCAGGCCAACCAGTTCGCGATGG 5809 Query 56807 CCGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCCGGCCTGAAGGCCGACG 56866 || ||| | || |||||||| ||| ||| || ||| ||||| | |||||| Sbjct 5810 CCAAGGCGATCGCATCGGGCGATCCGCGGCTGATGCAGAAGGCTGGCCTCGAAGCCGACA 5869 Query 56867 TCGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAGAAC 56913 ||| |||||| |||||| || | |||||| |||||| ||| || Sbjct 5870 TCGCGCGGCTCGAGCGCTTGCGTGCCGCGCATATCGACGATCAGCAC 5916 Score = 113 bits (124), Expect = 2e-20 Identities = 390/583 (67%), Gaps = 29/583 (5%) Strand=Plus/Plus Query 52939 ACGCAGTACGCGCACTACACCAGCGAGGGCGTGATCCGCTCGATCTACGACGGCCT-GCG 52997 ||||||||||| || | ||| |||| | ||||| |||||| |||||| | || Sbjct 1897 ACGCAGTACGCCCATTTCACGCCCGAGCTGATCGTCCGCGCGATCTG-GACGGCATTGCT 1955 Query 52998 CCGCCTGGGCTTCGCCGGCGGCAAGGTGCTCGAGCCGGGCATGGGTATCGGCCTGTTCAA 53057 || || |||| ||||||| ||||||||||||||||| || | || |||||| Sbjct 1956 GCGTCTCGGCTGGCGCGGCGGCCGCGTGCTCGAGCCGGGCATCGGCACGGGTCTGTTCCC 2015 Query 53058 GGGGCTGATGCCCGACAGCATGGCCGCGA--CCAGCCAGTACACGGGCGTGGAGTACGAC 53115 || | ||||||| || | || ||||| |||||| ||| || | ||| ||| Sbjct 2016 GGCGTTGATGCCGGAGGGACTG--CGCGATGTCAGCCATGTCACCGGTATCGAGCTCGAT 2073 Query 53116 GCGCTGACCGGCGCG-ATCGCGAAGCTGCTGTATCCGCAGAG-CAACATCATCGTCGGCG 53173 || | | ||||||| ||| | |||||| | |||| ||| | ||| || ||| | Sbjct 2074 CCGGTCA-CGGCGCGCATCTTGCGTCTGCTGCAGCCGC-GAGCCCGCATTGTCACCGGTG 2131 Query 53174 ACTTCACGAAAACCGCGATGCCGCGCGAGTTCTTCGACGCGGCGATCGGCAACCCGCCCT 53233 ||||| || ||||| | ||||| | | ||||||| || |||||||| ||||||| Sbjct 2132 ACTTCGCGCGAACCGAGCTGCCG---GCGGCCTTCGACCTTGCCATCGGCAATCCGCCCT 2188 Query 53234 TC-GCGTCCGTCGTCGTGACGA-ATGACCCCGAGTACAAGAAACAGGGGTTCATGCTGCA 53291 || || ||| | ||| ||| |||| || || |||| || ||||| Sbjct 2189 TCTCCGACCG-CACCGT-CCGATCGGACCGCGCCTATCGTTCGAAGGGCTTTCGCCTGCA 2246 Query 53292 CGACTACTTCTTCGCCAAGACCATCGACCGCGTGAAACCGGGCG-GCATGCTCGTGTTCG 53350 |||||| ||| |||| | |||||| |||| || |||| | ||| || |||| Sbjct 2247 CGACTATTTCATCGCGCGCGCGATCGACTTGCTGAAGCCCGGCGCTCTTGC-CGCCTTCG 2305 Query 53351 TCACCAGCAAGGGCACGATGGACAAGGCGAGCGACCGCGCGCGCCGTTACC---TCGCC- 53406 ||||| | |||||||||||||||||| || | || ||| | | ||||| Sbjct 2306 TCACCTCGCACGGCACGATGGACAAGGCG---GATTTCTCGGCGCGTGAGCATATCGCCG 2362 Query 53407 GACCGCGCGAACCTGATCGGCGCCATGCGCCTG-CCGCAGACCGCGTTCAAGGACAACGC 53465 || || || ||||| ||| |||||| || ||| ||| || | || ||| | | ||| Sbjct 2363 GATCG-GCCGACCTGGTCGCCGCCATTCGTCTGCCCGAAGGCAGC-TTCCGCGCCGCCGC 2420 Query 53466 CGGCACGGAAGTCGTTACGGACGTGCTGTTCCTCCAGAAGCGC 53508 |||||| || ||||| ||| | || ||| ||| |||||| Sbjct 2421 CGGCACCGACGTCGTGGTCGACCTTCTCTTCTTCCGCAAGCGC 2463 >seq1495 Length=154164 Score = 246 bits (272), Expect = 1e-60 Identities = 1303/2030 (64%), Gaps = 89/2030 (4%) Strand=Plus/Minus Query 54930 CTACAACGAGAACTTCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCT 54989 ||| ||||| |||||||||||||| ||| ||| ||||| |||||||| || | ||| Sbjct 37113 CTATAACGACCGCTTCAACAACATCGTGCCCCGCGCCTTCGAGGGCTCGCATCTAAAGCT 37054 Query 54990 GCCGGGCGTGTCGCTGCGC-TTCAACCTGCGCGAAAACCAGAAGCGCGCCATCTGGCGCG 55048 ||| |||| || |||| || ||| || | |||||||||| |||||||||| Sbjct 37053 GCCCGGCGCCTCAG-GCGCCTTTGTCCTCTACGGGCATCAGAAGCGCGGCATCTGGCGCA 36995 Query 55049 GCAT----TCAGGAAGGCGACATGTACCTCGCGCACGCGGTCGGCGCGGGCAAGACGTTC 55104 ||| || || ||||| | | ||||| ||||| |||||||| ||||||||| | Sbjct 36994 TCATCGCCTCGGGC--GCGACCTAT--CTCGCCCACGCCGTCGGCGCCGGCAAGACGATG 36939 Query 55105 ACGATGATCGCGACGGGCATGGAGGAGCGCCGGCTGGGCCTCTCCAACAAGCCGATGTAC 55164 || | ||| | ||||||| | |||||||| ||||| | |||| ||||| | Sbjct 36938 ACTTTTGCCGCCGCCATCATGGAGCAACGCCGGCTCGGCCTGATCGCCAAGGCGATGCTC 36879 Query 55165 GTGGTGCCGAACCACATGCTCGCGCAGTTCGCACGCGAATTCCTCGAGCTCTACCCGGCC 55224 || ||||| || || |||||| ||| ||||||||||| | |||||| |||| | Sbjct 36878 GTCGTGCCCGGTCATTGTCTGGCGCAGGCCGCGCGCGAATTCCTGGCGCTCTATCCGGGC 36819 Query 55225 GCGAACATCATGGTCGCGGACGAGCAGAATTTCCACACGCACAACCGCCGTCGCTTC--G 55282 || |||| | ||||| |||||| || || || | |||| || ||||||| | Sbjct 36818 GCCCGCATCCTCGTCGCCGACGAGACCAACTTTACCAAGGACAAGCGGTATCGCTTCCTG 36759 Query 55283 TCGCGCAGGCCGCGCTCAACAATCCGGATGCGGTCATCATCACGCACTCGGCGTTCGGCC 55342 |||||| || ||| | || ||||||| ||||||||||||||||||||||| | Sbjct 36758 TCGCGC--GCGGCGACCGCCAGCTGGGATGCGATCATCATCACGCACTCGGCGTTCCGGT 36701 Query 55343 GCATCGGCATGTCCGACGAGTACGCGGCGCAGTTCATCTCCGACCAGATCGACGAGTGGA 55402 ||||||| || | | || || |||| | ||| ||| || | || | | Sbjct 36700 TCATCGGCGTGCCATCGGCGTTCGAACAGCAGATGATCCAGGACGAGCTGGA-GCTTTAT 36642 Query 55403 AAGCCG-CGCTCGACGAGACGGACAAGAG-CGACCGGATCACGCGCAAGCAGATCGAGCG 55460 || || ||| | || ||| | | | |||||| || ||||||||| | |||| || Sbjct 36641 GAGACGTTGCTGACCAAGGTGGA-AGGCGACGACCGCGTCTCGCGCAAGCGGCTCGAACG 36583 Query 55461 CCGCATCGNNNNNNNNNNNNNNNNNNNNNNNGCGAAACAGGGCAGCGAGAAGAAGGACAA 55520 | | | |||| | | || | |||||| | Sbjct 36582 GCTGAAGGAGGGATTGAAGGAGCGGCT-----CGAAGC-GCTCACCACCCGCAAGGACGA 36529 Query 55521 GGTGCTGTCGTTCGAGGAGCTGGGCGTCGACCGTCTGTTCGTCGACGAATTCCACGAGTT 55580 ||||| || || ||| | ||||| |||| | |||||||||| || ||||| Sbjct 36528 TCTGCTGACGATCTCGGAAATCGGCGTTGACCAGATCATCGTCGACGAGGCGCAGGAGTT 36469 Query 55581 CCGCAAACTCGACTTCGCGACGCAGCAGAGCAAC-ATCAAGGGCATCGACCCGGCCGGCT 55639 | | |||||| |||||| || || || | || | |||||| |||| || ||| | Sbjct 36468 CAGAAAACTCTCCTTCGCCAC-CAACATGTCGACGTTGAAGGGCGTCGATCCCAACGGTT 36410 Query 55640 CGCAGCGCGCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCC 55699 |||||||||| |||||| | | |||| || | | | | ||||| ||||||| Sbjct 36409 CGCAGCGCGCCTGGGACCTTTATGTAAAGGCCCGTTTCATCGAGACGAAGAACCCGGGCC 36350 Query 55700 GCGCGCTCGTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCG 55759 |||| ||||| ||| |||||||||||| |||| |||||| | || ||| | | | | | Sbjct 36349 GCGCACTCGTCCTCGCCTCCGGCACGCCGATCACCAACACGCTCGGAGAGATGTTCTCGG 36290 Query 55760 CGCAACGCTTCTTCCAGCCCGAGCAGCTTGCAGAGGATGGTCTGGATACGTTCGACGCGT 55819 ||||||| | || || | |||| || || ||| | ||||||||| | Sbjct 36289 TCCAACGCTACCTCGGCTACGCGGCGCTTCTGGATCGCGGCCTGCACGAGTTCGACGCCT 36230 Query 55820 GGGC--CAACCAGTACGGCGACATCGTTGCGGGCTTCGAGCAGAACGCCGCCGGCGGCTA 55877 |||| | ||| | ||||||| || | | |||||| | || |||| || Sbjct 36229 GGGCCTCGACC--TTCGGCGACGTCTCGACTGAGCTCGAGCTCCAGCCCAACGGCAAGTA 36172 Query 55878 CGAGGTCGTGAGCCGCTTCGCGAAGTTCCAGAACGTGCCCGAGCTGATGCGCCGCG-TGC 55936 | || || | || ||||||| |||| ||||| ||||| |||| |||| | | | Sbjct 36171 CAAGCCGGTCACGCGGTTCGCGACGTTCGTCAACGTCCCCGAATTGAT-CGCCATGTTCC 36113 Query 55937 GCTCGTTCATGGACATCCTGACGAGCCAACAGCT-CGCGCAGTACGTCGACCGTCCGGCG 55995 |||| ||| ||| | ||| | | | | ||||| ||| ||| | ||||||| Sbjct 36112 GCTCTTTCGCCGACGTGGTGATGCCGGAGGATTTGCGCGC-GTATGTCAAAATTCCGGCG 36054 Query 55996 ATCGAGGGCGGCGGCCGTCAGATCATGGTCACGCCGGAGCCG---TTCGGCTACAAGGCA 56052 ||| | ||| || ||| || |||| || ||||| || | | |||| Sbjct 36053 ATCTCGACCGGAAAGCGGCAG---ATTTTCACCGCGAAGCCGACATTGGCGTTCAAGCGC 35997 Query 56053 TACCAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGCCCGCCGCAG 56112 |||||| |||||| ||| |||| |||||| | || | || |||||| || Sbjct 35996 TACCAGCTCCTGCTCGATGCGCGGATCAAGGCGATCGAGATGCGGGATGGGCCGCCGGAG 35937 Query 56113 AAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCGGCGATCGACATG 56172 || | |||||| | || || ||| | || ||||| | |||||||| || Sbjct 35936 CCCGGCGACGACATCCTGCTCTCTGTCATCACCGATGGCCGGCATGCCGCGATCGATCTG 35877 Query 56173 CGTTTCGTCGA-CCCGACCGCGCCGAGCGACCCGAACAGCAAGCTGAACCAGATGATCG- 56230 ||| | ||||| || ||| || | | ||| ||| ||| ||||||||||| | | ||| Sbjct 35876 CGTCTGGTCGATCCGGACAACGAC-AACGAGCCGGACAACAAGCTGAACCTGCTCGTCGC 35818 Query 56231 --ACGCCGTGATCGCCGACTACCATGCGGCATC--CGA----CTACCAGTACACGACGAA 56282 ||||| || || | || || | | | || ||| |||| || | || || | Sbjct 35817 CAACGCCCTG--CG-CATCTGGCAGGAGACGTCGGCGAACAGCTAC--GTGCGCGCCG-A 35764 Query 56283 CGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTCACGGACATCGGGCTCGG 56342 ||||||| | || | | ||||| |||| || ||||| | || |||| | Sbjct 35763 CGGCAAGCCCTACGAGCTGCCTGGCGCCGCGCAGATGATCTTTTCCGATCTCGGCACCAT 35704 Query 56343 CGAGCAGTCGGCGAAGAACCGCGGCT--TCGACATGAAGGCGTGGATCGAAAAGCGTCTG 56400 | | ||| | ||||| ||||||| ||| | | | || |||||| | | || Sbjct 35703 CAA--CGTC-GAGAAGACACGCGGCTTCTCGGCCT-ATCGC-TGGATCAGAGACGAACTC 35649 Query 56401 GTCGAGGGCGGCGTGCCCCGCGAGC-AGATCGCGTTCATGCGCGACAACAAGGAGCACGC 56459 ||| |||||| || ||| | ||||||| ||||||| ||| |||| || || Sbjct 35648 GTCCGTCTCGGCGT-ACCGGCGTCCGAGATCGCCTTCATGCAGGACTTCAAGAAGTCCGA 35590 Query 56460 GAAGAAAGAGCGTCTTTTCGCCGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGG 56519 | || |||| || |||| |||| |||||| ||||| ||| | || |||||| Sbjct 35589 GGCCAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTCCGCTTCCTCATCGGCTC 35530 Query 56520 CAAGGAC---ATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACAGCG-AGGAGCATC 56575 | ||| |||| || ||||| |||| ||| || || | ||| | || | Sbjct 35529 CTCCGACACAATGGGCACTGGCGTGAACGCACAGCTTCGGCT-GAAGGCGCTCCATCACC 35471 Query 56576 TGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGGCGCATCATCCGCCAGG 56635 | |||| ||||||| | ||| | ||| |||||||||||| || ||| || |||| Sbjct 35470 TCGACGTGCCGTGGCTGCCGTCGCAGATCGCGCAGCGCGAGGGCCGGATCGAGCGACAGG 35411 Query 56636 GCAACCAGAACAAGCAGGT--GCG-CATCCGCGCGTGGGCGACGAAGGG--CAGCTACGA 56690 |||| ||| || | | || || |||| ||| | || || |||| || || || Sbjct 35410 GCAATCAG--CATG-ATGTCATCGACATCTTCGCCTATGCCACTGAGGGTTCA-CT-TGA 35356 Query 56691 CTCGACCATGTGGGGGATGAACGCCCGCAAGGCTCGCTTCATCGAACAGGCCCTCAACGG 56750 | ||| ||||||| || || | |||||||| |||||||||| || ||| || Sbjct 35355 CGCGAGCATGTGGCAGAACAATGAGCGCAAGGCCCGCTTCATCGCCGCCGCGCTCTCGGG 35296 Query 56751 CGACGACAGCG-TGCGCTCGCTGGAGGACGTGTCCGAGGCGTCGGC------GTTCGACA 56803 |||| || || | ||| || ||||| | ||| | ||| ||||| || Sbjct 35295 CGAC-ACGTCGATCCGCCGACTCGAGGATCTCGGCGAAGGCCAGGCCAACCAGTTCGCCA 35237 Query 56804 TGGCCGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCTGGCCGGCCTGAAGGCCG 56863 ||||| ||| | ||| |||||| |||| ||| || |||||| || | |||| Sbjct 35236 TGGCCAAGGCGATCGCGAGCGGCGACCAGCGGCTGATGCAGAAGGCCGGGCTCGAAGCCG 35177 Query 56864 ACGTCGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAGAAC 56913 || ||| ||||| || |||||| || |||||| |||||| ||| || Sbjct 35176 ACATCGCCCGGCTCGAACGCCTGCGCGCCGCGCATATCGACGATCAGCAC 35127 >seq838 Length=171352 Score = 138 bits (152), Expect = 5e-28 Identities = 311/461 (67%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 54883 CGATGGATTTGGACCGACACGCAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAAC 54942 || ||| | ||||||||| | | || ||||||| || | ||| || || | Sbjct 14575 CGCTGGGTCTGGACCGACCCTGACCGTACCGACCGACTGGCGCGGGTCTATAATGATCGC 14634 Query 54943 TTCAACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTC- 55001 |||||||| ||||||||||| | |||||||||||||| || | ||| || |||| || Sbjct 14635 TTCAACAATATCGCGCCGCGAAAATTCGACGGCTCGCATCTCAAGCTTCCTGGCGCCTCT 14694 Query 55002 GCTGCGCTTCAACCTGCGCGAAAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGG 55061 | || |||| ||| | |||||||||| | |||||||||| ||| || || Sbjct 14695 GGCGC-CTTCGTCCTTTATGGGCACCAGAAGCGTGGCATCTGGCGCATCATCGCCGATGG 14753 Query 55062 CGACATGTACCTCGCGCACGCGGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGG 55121 || | || ||||| ||||| || ||||| |||||||| | || ||| ||| || Sbjct 14754 CGCGACCTATCTCGCCCACGCCGTTGGCGCCGGCAAGACCATGACAATGGCCGCCGCGAT 14813 Query 55122 CATGGAGGAGCGCCGGCTGGGCCTCTCCAACAAGCCGATGTACGTGGTGCCGAACCACAT 55181 |||||| ||||||| || || || | |||| ||||| || || || || Sbjct 14814 CATGGAACAGCGCCGTCTCGGGCTGATCGCCAAGGCGATGCTGGTCGTTCCCGGACATTG 14873 Query 55182 GCTCGCGCAGTTCGCACGCGAATTCCTCGAGCTCTACCCGGCCGCGAACATCATGGTCGC 55241 || |||||| ||| || ||||| || | ||||| ||| ||| |||| | ||||| Sbjct 14874 CCTGGCGCAGGCCGCGCGTGAATTTCTGGCCCTCTATCCGAACGCCCGCATCCTTGTCGC 14933 Query 55242 GGACGAGCAGAATTTCCACACGCACAACCG----CCGTCGCTTCGTCGCGCAGGCCGCGC 55297 |||||| ||||| || | |||| || | || || | ||||| |||| || Sbjct 14934 TGACGAGACCAATTTTTCCAAGGACAAGCGCGCACGGTTTCTAAGCCGCGC-GGCCACG- 14991 Query 55298 TCAACAATCCGGATGCGGTCATCATCACGCACTCGGCGTTC 55338 | || |||||| |||||||||| |||||||| ||| Sbjct 14992 GCGAC--GTGGGATGCCATCATCATCACTCACTCGGCCTTC 15030 Score = 104 bits (114), Expect = 1e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 55537 GAGCTGGGCGTCGACCGTCTGTTCGTCGACGAATTCCACGAGTTCCGCAAACTCGACTTC 55596 ||| | |||||||||| | ||||||| || || ||||||||||| || |||| Sbjct 15223 GAGATCGGCGTCGACCAGATCGTCGTCGATGAGGCGCAGGAGTTCCGCAAGCTGTCCTTC 15282 Query 55597 GCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATGGAC 55656 || || | ||||| | ||||||||||||||| ||||||||||||||| |||| Sbjct 15283 GCCACCAATATGAGCACGCTGAAGGGCATCGACCCGAACGGCTCGCAGCGCGCATGGGAC 15342 Query 55657 CTGTTCATGAAGGTCCAATACCTGCGCAGCAAGAAGCCGGGCCGCGCGCTCGTGGCCGCG 55716 || | | || || | | | | |||||| || ||||| ||||| ||| || Sbjct 15343 CTCTATGTCAAATCCCGCTTCATCGAGACCAAGAACCCAGGCCGTGCGCTGGTGCTGGCC 15402 Query 55717 TCCGGCACGCCGGTCACGAACACGATGGGCGA 55748 || ||||||||| |||| |||||| | ||||| Sbjct 15403 TCTGGCACGCCGATCACCAACACGCTCGGCGA 15434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204293867674377