Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_005342.2 Length=48024 Score E Sequences producing significant alignments: (Bits) Value seq724 104 7e-18 >seq724 Length=279373 Score = 104 bits (114), Expect = 7e-18 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 5813 TCCATGCCAATGAAGCGCCGGCCGGTATTTATGCACGCCACGCCCGTGGTGCCGCTGCCC 5872 |||||||| |||||| | ||||| | | | | || |||||||| |||||||| ||| Sbjct 197857 TCCATGCCGATGAAGTGACGGCCAGCTTGCAGGGCGGCGACGCCCGTCGTGCCGCTCCCC 197798 Query 5873 ATGCAGTTGTCCAGCACCGTGTCGCCTTCGCTGGTATACGTGCGGATCAGATACTCCATC 5932 ||| | ||||||||||||||| ||||| | | | | |||||||||| || |||||| Sbjct 197797 ATGGTGCAATCCAGCACCGTGTCGGCTTCGTTCGAAAAGGTGCGGATCAAGTAGTCCATC 197738 Query 5933 AGCGCGACGGGTTTT 5947 |||||||| || ||| Sbjct 197737 AGCGCGACCGGCTTT 197723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153552466621468