Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_005887.1 Length=42415 Score E Sequences producing significant alignments: (Bits) Value seq1095 127 6e-25 >seq1095 Length=1089284 Score = 127 bits (140), Expect = 6e-25 Identities = 311/469 (66%), Gaps = 14/469 (3%) Strand=Plus/Plus Query 32072 GTGCGGGGCACCGACGCCCGCAGACGGAAA---CGGGACACACCCATAGGCGTAGTCCAG 32128 ||| || || ||||||||||||| || | | ||| || ||| |||| || |||| Sbjct 151045 GTGTGGCGCGCCGACGCCCGCAG-CGCACAGATCGG--CAGTCCCGCAGGCATATCCCAG 151101 Query 32129 CGCTTCCACGTCAGTTTGTACAAGGTCGATCCAGTCGTCGACAGCGCT-GCTCGCAACCT 32187 |||||| ||||| ||| | ||| ||| || || | | || ||||||||||| Sbjct 151102 GTCTTCCAGGTCAGCACGTATTCCGGCGAGCCATTCA-CGTCCGTCCTTGCTCGCAACCT 151160 Query 32188 GTTCTCCAAACACCACTGCAGGTCGGCGCTCAGCGATGAGCCAGTGCCAGTGCGGCCAGA 32247 | |||||||| || | || ||| || || |||||||| | ||| | ||||| | Sbjct 151161 GCTCTCCAAAGACGATTGAAGGCGAGCAGTCGGCGATGAGGCTGTGAAAAGCGGGCCACA 151220 Query 32248 GGTGCCGCTCGTCATCAAACCCGC--CACCTTTGCCTGCCGCGGAGAAAGGTTGGCACGG 32305 |||| | ||||| | ||| | |||| || || | || | || || || || Sbjct 151221 GGTGTCTATCGTCGGCGTGCCCCTTGCGCCTT--CCCGCGCCCGAAAGCGGCTGACAGGG 151278 Query 32306 GCATGATCCGGTCCACACGGGGCGATCGTCGGGCCAGCCGGCGCGCCGCAGTGCGTAGGA 32365 || ||||||||||| |||||| || ||||| || ||| |||||| |||||| Sbjct 151279 ACAGGATCCGGTCCAACATTCGCGATCATCCGGCCATCCTGCGAGCCGCAAGGCGTAGCT 151338 Query 32366 CCACACGCCGATGCCGGCGAAGAAATGGCACTGGC-TGTATCCGCGCAGGTCATCAGGTT 32424 ||| |||| || ||||||||||||| || || || |||| || |||| ||| || || Sbjct 151339 CCATCCGCCAATCCCGGCGAAGAAAT-GCGCTTGCGTGTAGCCTCGCACGTCGTCGGGCC 151397 Query 32425 GGACATCCTCGATACTCCTTTCGTCGACGTGGCCGGNNNNNNNNNNNNNNNNNNNNNNNN 32484 |||||| |||| || | ||||| |||| ||| | Sbjct 151398 TGACATCGACGATGCTTCGCTCGTCAACGTCGCCTGGCGCGATGAGCCCGGCAGCGATGA 151457 Query 32485 GGTTGCGCAGCCACTGCGCGGCGTGCGGATCGATCTCGTTGTAGTAGGC 32533 |||| || ||||||||||| ||| |||||| | ||||||||||| || Sbjct 151458 GGTTTCGGAGCCACTGCGCTGCGAACGGATCAAATTCGTTGTAGTACGC 151506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135603986121326