Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq718 87.8 4e-13
>seq718
Length=4967
Score = 87.8 bits (96), Expect = 4e-13
Identities = 142/201 (71%), Gaps = 5/201 (2%)
Strand=Plus/Minus
Query 5527 TTTTAGACTTAATTGGAACTGCCCAGGCATATTTTGAAAATATATCTATGATTGTAAGCA 5586
|||| ||| |||||| |||||| |||||||||||||||| ||| || | ||||| |
Sbjct 3401 TTTTCGACG-AATTGGTCTTGCCCAAGCATATTTTGAAAATACATCGATAACAGTAAGTA 3343
Query 5587 GATACTTGTATCCTTTATTGACTGTTGCATATGGAATCATCTCAACCAAGTCAGCTTG-- 5644
|||| |||| | ||| || | ||||||| ||||| ||||| | ||||||||
Sbjct 3342 GATAACGAAATCCATCATTTTCTTTCTCATATGGTATCATTTCAACGAGATCAGCTTGAA 3283
Query 5645 CCAAGTCTCATCGAGACCTCGGATATCAACATGACGACGTTTATAGTTTCTACGAGCTGG 5704
|| |||| | | |||||| | || ||||| | || | ||| || | ||||| ||
Sbjct 3282 ATAAATCTCGT--AAACCTCGAACATAGACATGTCTGCGATAATAATTACGTCGAGCAGG 3225
Query 5705 TTTGTGAAGCTCTTCAGCTAT 5725
||||| | ||||| || ||
Sbjct 3224 CTTGTGTAATTCTTCTGCAAT 3204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97972655994446
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |