Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq718 87.8 4e-13 >seq718 Length=4967 Score = 87.8 bits (96), Expect = 4e-13 Identities = 142/201 (71%), Gaps = 5/201 (2%) Strand=Plus/Minus Query 5527 TTTTAGACTTAATTGGAACTGCCCAGGCATATTTTGAAAATATATCTATGATTGTAAGCA 5586 |||| ||| |||||| |||||| |||||||||||||||| ||| || | ||||| | Sbjct 3401 TTTTCGACG-AATTGGTCTTGCCCAAGCATATTTTGAAAATACATCGATAACAGTAAGTA 3343 Query 5587 GATACTTGTATCCTTTATTGACTGTTGCATATGGAATCATCTCAACCAAGTCAGCTTG-- 5644 |||| |||| | ||| || | ||||||| ||||| ||||| | |||||||| Sbjct 3342 GATAACGAAATCCATCATTTTCTTTCTCATATGGTATCATTTCAACGAGATCAGCTTGAA 3283 Query 5645 CCAAGTCTCATCGAGACCTCGGATATCAACATGACGACGTTTATAGTTTCTACGAGCTGG 5704 || |||| | | |||||| | || ||||| | || | ||| || | ||||| || Sbjct 3282 ATAAATCTCGT--AAACCTCGAACATAGACATGTCTGCGATAATAATTACGTCGAGCAGG 3225 Query 5705 TTTGTGAAGCTCTTCAGCTAT 5725 ||||| | ||||| || || Sbjct 3224 CTTGTGTAATTCTTCTGCAAT 3204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97972655994446