Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq713 91.5 6e-14 seq743 89.7 2e-13 >seq713 Length=1192841 Score = 91.5 bits (100), Expect = 6e-14 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 7537 CCCATATTCCGGCTCTTCGGCTACGCGGGGACGGGCAAGACCACGCTGGCCAAGCACCTG 7596 ||| | ||||| || ||||||||||| || || ||||||||||| ||||| || | Sbjct 113732 CCCGTGTTCCGCCTGTTCGGCTACGCCGGCACCGGCAAGACCACACTGGCGCGACATATC 113673 Query 7597 GCCGAGGGCGTCTCGGGCCGAGTGAAGTTCGCCGCGTACACTGGCAAGGCGGCCCAGGTC 7656 || || |||||| ||| |||||| |||||||| | ||| || |||||||| | ||| Sbjct 113672 GCGGACGGCGTCGACGGCGAAGTGAAATTCGCCGCCTTCACCGGAAAGGCGGCGCTGGTG 113613 Query 7657 CTCAGCGAGAAGGGCTGC 7674 | || | ||||||||| Sbjct 113612 ATGCGCAACAAGGGCTGC 113595 Score = 82.4 bits (90), Expect = 3e-11 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 7921 GTCGTTGACGAGTGTTCGATGGTCGACATGCAGG--TCGGTCAAGACCTCCTCTCCTTCG 7978 ||| | ||||| || ||||||||||| ||| | |||| | ||||| | || |||| Sbjct 113483 GTCATCGACGAATGCTCGATGGTCGA--TGCCGAACTCGGCCGCGACCTGATGTCGTTCG 113426 Query 7979 AC-GTCCCCATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGC 8037 | |||| | | | ||||||||||| || || ||||| ||||| | || || || Sbjct 113425 AATGTCCGC-TATTGGTGCTCGGCGATCCCGCGCAGCTTCCGCCGATTCAAGGCGGCGGT 113367 Query 8038 TTCTTCACGGAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGAC 8097 || ||||| || || |||||||| ||||||||| || | || || |||||| || || Sbjct 113366 TTTTTCACCGATTCCGAGCCGGACGCGATGCTGACCGAAGTGCATCGTCAGGCCGAGCAC 113307 Query 8098 AACCCCATCATCGAGATGGCGACCCGCGTCCGCGA 8132 | || ||| || ||| ||| ||| ||||| Sbjct 113306 GATCCGATCGTCCGCATGTCGATGGCCGTGCGCGA 113272 >seq743 Length=263205 Score = 89.7 bits (98), Expect = 2e-13 Identities = 130/182 (71%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 7927 GACGAGTGTTCGATGGTCGACATGCAGGTC--GGTCAAGACCTCCTCTCCTTCGACGTCC 7984 ||||| |||||||||||||| ||| | || || | ||||| | || |||||| || Sbjct 181888 GACGAATGTTCGATGGTCGA--TGCCGATCTTGGGCGCGACCTGATGTCGTTCGACTGCC 181945 Query 7985 CCATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTCTTCA 8044 | | || ||||||||||| || || ||| | || || || ||| || |||||||||| Sbjct 181946 CTCTGCTGGTGCTCGGCGATCCCGCACAGTTGCCACCGATCGCGGGGGGCGGCTTCTTCA 182005 Query 8045 CGGAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAACCCCA 8104 | || || | || ||| |||||||| || | || |||||||| || || | || | Sbjct 182006 CCGAAGCGGAACCCGACGCTATGCTGACCGAGGTACATCGCCAGGCGCAGAACGATCCGA 182065 Query 8105 TC 8106 || Sbjct 182066 TC 182067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203548281295790