Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_006938.1
Length=63649
Score E
Sequences producing significant alignments: (Bits) Value
seq713 91.5 6e-14
seq743 89.7 2e-13
>seq713
Length=1192841
Score = 91.5 bits (100), Expect = 6e-14
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 7537 CCCATATTCCGGCTCTTCGGCTACGCGGGGACGGGCAAGACCACGCTGGCCAAGCACCTG 7596
||| | ||||| || ||||||||||| || || ||||||||||| ||||| || |
Sbjct 113732 CCCGTGTTCCGCCTGTTCGGCTACGCCGGCACCGGCAAGACCACACTGGCGCGACATATC 113673
Query 7597 GCCGAGGGCGTCTCGGGCCGAGTGAAGTTCGCCGCGTACACTGGCAAGGCGGCCCAGGTC 7656
|| || |||||| ||| |||||| |||||||| | ||| || |||||||| | |||
Sbjct 113672 GCGGACGGCGTCGACGGCGAAGTGAAATTCGCCGCCTTCACCGGAAAGGCGGCGCTGGTG 113613
Query 7657 CTCAGCGAGAAGGGCTGC 7674
| || | |||||||||
Sbjct 113612 ATGCGCAACAAGGGCTGC 113595
Score = 82.4 bits (90), Expect = 3e-11
Identities = 150/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 7921 GTCGTTGACGAGTGTTCGATGGTCGACATGCAGG--TCGGTCAAGACCTCCTCTCCTTCG 7978
||| | ||||| || ||||||||||| ||| | |||| | ||||| | || ||||
Sbjct 113483 GTCATCGACGAATGCTCGATGGTCGA--TGCCGAACTCGGCCGCGACCTGATGTCGTTCG 113426
Query 7979 AC-GTCCCCATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGC 8037
| |||| | | | ||||||||||| || || ||||| ||||| | || || ||
Sbjct 113425 AATGTCCGC-TATTGGTGCTCGGCGATCCCGCGCAGCTTCCGCCGATTCAAGGCGGCGGT 113367
Query 8038 TTCTTCACGGAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGAC 8097
|| ||||| || || |||||||| ||||||||| || | || || |||||| || ||
Sbjct 113366 TTTTTCACCGATTCCGAGCCGGACGCGATGCTGACCGAAGTGCATCGTCAGGCCGAGCAC 113307
Query 8098 AACCCCATCATCGAGATGGCGACCCGCGTCCGCGA 8132
| || ||| || ||| ||| ||| |||||
Sbjct 113306 GATCCGATCGTCCGCATGTCGATGGCCGTGCGCGA 113272
>seq743
Length=263205
Score = 89.7 bits (98), Expect = 2e-13
Identities = 130/182 (71%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 7927 GACGAGTGTTCGATGGTCGACATGCAGGTC--GGTCAAGACCTCCTCTCCTTCGACGTCC 7984
||||| |||||||||||||| ||| | || || | ||||| | || |||||| ||
Sbjct 181888 GACGAATGTTCGATGGTCGA--TGCCGATCTTGGGCGCGACCTGATGTCGTTCGACTGCC 181945
Query 7985 CCATCCTCGTGCTCGGCGACCCGGCCCAGCTCCCGCCCGTCATGGGAGGTGGCTTCTTCA 8044
| | || ||||||||||| || || ||| | || || || ||| || ||||||||||
Sbjct 181946 CTCTGCTGGTGCTCGGCGATCCCGCACAGTTGCCACCGATCGCGGGGGGCGGCTTCTTCA 182005
Query 8045 CGGAGGCCAAGCCGGACATGATGCTGACGGACATCCACCGCCAGGCCAAGGACAACCCCA 8104
| || || | || ||| |||||||| || | || |||||||| || || | || |
Sbjct 182006 CCGAAGCGGAACCCGACGCTATGCTGACCGAGGTACATCGCCAGGCGCAGAACGATCCGA 182065
Query 8105 TC 8106
||
Sbjct 182066 TC 182067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 203548281295790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |