Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_007022.1
Length=172963
Score E
Sequences producing significant alignments: (Bits) Value
seq811 102 9e-17
seq998 96.9 4e-15
seq1095 84.2 2e-11
>seq811
Length=194255
Score = 102 bits (112), Expect = 9e-17
Identities = 100/128 (78%), Gaps = 1/128 (1%)
Strand=Plus/Plus
Query 6479 AAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAG 6538
|||||| |||||| | ||||| || ||||| | |||||||||||||| |||||||||
Sbjct 149812 AAGCAAC-AGCCTTACCGGCGATGACGTGCATCAGCGGACCACCCTGAAGACCCGGGAAC 149870
Query 6539 ATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGA 6598
| ||| ||||| | ||||||||||| || || ||||| || || || | ||||| ||
Sbjct 149871 ACAGCCGAATTGATCTTCTTGGCGATGTCGGCGTCGTTGGTGAGGATCATGCCACCGCGT 149930
Query 6599 GGGCCGCG 6606
|| |||||
Sbjct 149931 GGTCCGCG 149938
>seq998
Length=1052685
Score = 96.9 bits (106), Expect = 4e-15
Identities = 94/121 (78%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 6488 GCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAGATAGCAGAA 6547
||||| || ||||| |||||||| | ||| || ||||| | || |||||||| || |||
Sbjct 448404 GCCTTGGCGGCGATGACATGCATCAGCGGGCCGCCCTGCAGGCCGGGGAAGATCGCCGAA 448345
Query 6548 TTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGAGGGCCGCGC 6607
|| | ||||||||||| || | ||||| || || || || || ||||| |||||||||
Sbjct 448344 TTGATCTTCTTGGCGATCTCCTCGTCGTTGGTGAGGATCAGGCCGCCACGCGGGCCGCGC 448285
Query 6608 A 6608
|
Sbjct 448284 A 448284
>seq1095
Length=1089284
Score = 84.2 bits (92), Expect = 2e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 6488 GCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAGATAGCAGAA 6547
||||| || ||||| |||||||| | ||| || ||||| | || |||||||| || ||
Sbjct 926558 GCCTTGGCGGCGATCACATGCATCAGCGGGCCGCCCTGCAAGCCGGGGAAGATCGCGGAG 926617
Query 6548 TTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGAGGGCCGCGC 6607
|| | ||||||||||| || | ||||| || || || ||||| || |||||||||
Sbjct 926618 TTGAGCTTCTTGGCGATCTCCTCGTCGTTGCACAGGATCAGGCCACCGCGCGGGCCGCGC 926677
Query 6608 A 6608
|
Sbjct 926678 A 926678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 553343231536920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |