Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq811 102 9e-17 seq998 96.9 4e-15 seq1095 84.2 2e-11 >seq811 Length=194255 Score = 102 bits (112), Expect = 9e-17 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 6479 AAGCAAATAGCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAG 6538 |||||| |||||| | ||||| || ||||| | |||||||||||||| ||||||||| Sbjct 149812 AAGCAAC-AGCCTTACCGGCGATGACGTGCATCAGCGGACCACCCTGAAGACCCGGGAAC 149870 Query 6539 ATAGCAGAATTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGA 6598 | ||| ||||| | ||||||||||| || || ||||| || || || | ||||| || Sbjct 149871 ACAGCCGAATTGATCTTCTTGGCGATGTCGGCGTCGTTGGTGAGGATCATGCCACCGCGT 149930 Query 6599 GGGCCGCG 6606 || ||||| Sbjct 149931 GGTCCGCG 149938 >seq998 Length=1052685 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 6488 GCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAGATAGCAGAA 6547 ||||| || ||||| |||||||| | ||| || ||||| | || |||||||| || ||| Sbjct 448404 GCCTTGGCGGCGATGACATGCATCAGCGGGCCGCCCTGCAGGCCGGGGAAGATCGCCGAA 448345 Query 6548 TTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGAGGGCCGCGC 6607 || | ||||||||||| || | ||||| || || || || || ||||| ||||||||| Sbjct 448344 TTGATCTTCTTGGCGATCTCCTCGTCGTTGGTGAGGATCAGGCCGCCACGCGGGCCGCGC 448285 Query 6608 A 6608 | Sbjct 448284 A 448284 >seq1095 Length=1089284 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 6488 GCCTTTGCCGCGATAACATGCATTAACGGACCACCCTGAATACCCGGGAAGATAGCAGAA 6547 ||||| || ||||| |||||||| | ||| || ||||| | || |||||||| || || Sbjct 926558 GCCTTGGCGGCGATCACATGCATCAGCGGGCCGCCCTGCAAGCCGGGGAAGATCGCGGAG 926617 Query 6548 TTTACTTTCTTGGCGATATCAGCATCGTTAGTAAGAATGAGACCACCACGAGGGCCGCGC 6607 || | ||||||||||| || | ||||| || || || ||||| || ||||||||| Sbjct 926618 TTGAGCTTCTTGGCGATCTCCTCGTCGTTGCACAGGATCAGGCCACCGCGCGGGCCGCGC 926677 Query 6608 A 6608 | Sbjct 926678 A 926678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553343231536920