Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_007052.1 Length=45861 Score E Sequences producing significant alignments: (Bits) Value seq720 262 1e-65 >seq720 Length=4951 Score = 262 bits (290), Expect = 1e-65 Identities = 681/1024 (67%), Gaps = 53/1024 (5%) Strand=Plus/Plus Query 25879 ATTATTAATCTCTATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTAC 25938 |||||||| |||||| || ||||| | |||||||||||||||| ||| | Sbjct 267 ATTATTAACGATCATCACCATTATTAATAGTACCTTTAACAATAACATAATC-ACATTTT 325 Query 25939 GT-AATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGC 25997 || |||| || ||||| ||||| ||||| ||||| | ||||||||||| || | Sbjct 326 GTTAATGCAGATAAATCTTTACCACCAGCATAAGAAATAGCAGATTGTAAATCTTCTTCC 385 Query 25998 ATTTCTTTTAAGGTATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCT 26057 |||||||| | ||||| | ||| || |||| | |||| |||||||||||||| Sbjct 386 ATTTCTTTATAAGTATCAGCAATTGAACCTTTATATGGAACAAGTATTTTTTTACCTTCA 445 Query 26058 ACATTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGT 26117 | |||||| ||| |||| | ||| | ||| |||||||||||||| || | Sbjct 446 ATATTTTTCGCTTCCGCTTTGTTAAAAATACTTGCTGATCCAAAATATTCTTTGTAAGAT 505 Query 26118 TTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGC--AAATAATGAAC 26175 | ||||| | | ||| ||| ||||||||||| || | |||| ||||| | | Sbjct 506 TGACCATTTATTGTAACAATTTTGCCAGGTGATTCATCATAACCCGCTAAAATACT--TC 563 Query 26176 CAATCATGACCATTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTA 26235 | ||| | ||| | |||||||| |||| ||||| || || |||| ||| | Sbjct 564 CTGCCATAATCATAGTGGCACCAAAAGCTATTGCTTTAGCAATATCACCATTACATCTAA 623 Query 26236 TGCCACCATCGGCAATCAAAGGTTTACGAGCTGC--TTTACTACATATGTTTAATGCCGC 26293 | |||||||| ||||| || |||||| | | ||| || | |||| | | ||| || Sbjct 624 TACCACCATCTGCAATTAATGGTTTA-GTGGTGCTATTGGCAACATCT-TGTAAAGCATT 681 Query 26294 TAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGG 26353 ||| || |||||||| |||||||| || ||||| | || ||||||||| || | || || Sbjct 682 TAATTGTCAACCACCTGTACCAAATCCAGTTTTTAGTTTAGTAATACAAGCTTTTCCTGG 741 Query 26354 ACCTATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACC---TTC 26410 || | ||| | ||| | |||||||| || |||||||| ||| ||||| | || Sbjct 742 GCCAACACCAAATTTAATTGCATCAGCGCCTCATTTTTCTAAATCTTTAACAGCGGTTTT 801 Query 26411 TGGCGTACCAACATTACCAGCAATAACAAAACTATCAGGTATATG-------------GG 26457 || | | ||| ||||||||||||| |||| | | |||| || | Sbjct 802 TGTCAT---AACGTTACCAGCAATAATAAAAGGTTTA-GTATTTGTTTTAGCAAAAGTAG 857 Query 26458 TTTTAATATGTTTAATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTG 26517 |||| ||| ||||||||| | | || | || |||||||| |||||||| || | Sbjct 858 TTTTTATAAATTTAATCATTTCTTCCATAGCATTACTATGACCATGTGCAATATCAATAG 917 Query 26518 TAATATATTCGGGGATTA-ATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGCT 26576 ||||| |||| || |||| ||| |||| ||| | ||||| || || ||| || Sbjct 918 TAATAAATTCTGGAATTAGATTCAGTTTGA-TTAATTGTTCAAGTAACTCTTTATCCTCT 976 Query 26577 TTCTTTACACCAACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATAAAA 26636 || || ||||||| ||| || ||| |||| | | |||||| ||| ||||| Sbjct 977 TTTTTAACACCAATGCTAATTGAAGCATATAACTTTTGTTCATGCATACTTTTAATAAA- 1035 Query 26637 GGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCAAAC 26696 | | || || || |||||| ||||| | ||||||||||| ||||| ||| | Sbjct 1036 --TTTAATTTGATCGATATTAAAACGGTGCATTACATAAAAGTAATTATTTTTAGCCGAT 1093 Query 26697 CATTTCGCTAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGCTTG 26756 || | ||||| | || || || | ||||||||| |||| || | | Sbjct 1094 CAAATACATAATTCTTGGTTAATGACAGCACTCATATTTGCCGGAA-------TAATTGG 1146 Query 26757 AATTTT----TTCGGACCA---AATTGGATAGTTGTATCACATTCTGATCTACTCTCAAC 26809 |||||| | |||| | || | | | |||||||||||| || | ||| Sbjct 1147 AATTTTAAAAGTAAAACCATTTAGTTTAACACTGGTATCACATTCTTTTCGTGATTTAAC 1206 Query 26810 TATACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAAT---ATTTTCA-TTTTTA 26865 ||| | |||||| | |||| | ||||||||| | |||||| | |||| |||||| Sbjct 1207 TATTCCTTTATTTGCAATTAGATTTATATCTTCAAAATCAAATTTCACATTCATTTTTTA 1266 Query 26866 TTTA 26869 |||| Sbjct 1267 TTTA 1270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146630989830274