Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_007052.1
Length=45861
Score E
Sequences producing significant alignments: (Bits) Value
seq720 262 1e-65
>seq720
Length=4951
Score = 262 bits (290), Expect = 1e-65
Identities = 681/1024 (67%), Gaps = 53/1024 (5%)
Strand=Plus/Plus
Query 25879 ATTATTAATCTCTATCACCGTTGAAAATAGAGTTTCTAACAATAACATAATCTACAGTAC 25938
|||||||| |||||| || ||||| | |||||||||||||||| ||| |
Sbjct 267 ATTATTAACGATCATCACCATTATTAATAGTACCTTTAACAATAACATAATC-ACATTTT 325
Query 25939 GT-AATGATTTCAAGTCTTTTCCACCGGCATATGAAATTGAGCTTTGTAAATCTTGTTGC 25997
|| |||| || ||||| ||||| ||||| ||||| | ||||||||||| || |
Sbjct 326 GTTAATGCAGATAAATCTTTACCACCAGCATAAGAAATAGCAGATTGTAAATCTTCTTCC 385
Query 25998 ATTTCTTTTAAGGTATCCATTAATGACCCCTTATGTTCTACAAACAtttttttACCTTCT 26057
|||||||| | ||||| | ||| || |||| | |||| ||||||||||||||
Sbjct 386 ATTTCTTTATAAGTATCAGCAATTGAACCTTTATATGGAACAAGTATTTTTTTACCTTCA 445
Query 26058 ACATTTTTATGTTCGCCTTTTTGAAATTCAGATGCACTACCAAAATATTCTTTATACTGT 26117
| |||||| ||| |||| | ||| | ||| |||||||||||||| || |
Sbjct 446 ATATTTTTCGCTTCCGCTTTGTTAAAAATACTTGCTGATCCAAAATATTCTTTGTAAGAT 505
Query 26118 TTACCATCAAGTTCTACAGTTTCACCAGGTGATTCTTCGTGTGCCGC--AAATAATGAAC 26175
| ||||| | | ||| ||| ||||||||||| || | |||| ||||| | |
Sbjct 506 TGACCATTTATTGTAACAATTTTGCCAGGTGATTCATCATAACCCGCTAAAATACT--TC 563
Query 26176 CAATCATGACCATTGATGCACCAAATCTAATTGACTTAGCGATGTCGCCATGCGTTCTTA 26235
| ||| | ||| | |||||||| |||| ||||| || || |||| ||| |
Sbjct 564 CTGCCATAATCATAGTGGCACCAAAAGCTATTGCTTTAGCAATATCACCATTACATCTAA 623
Query 26236 TGCCACCATCGGCAATCAAAGGTTTACGAGCTGC--TTTACTACATATGTTTAATGCCGC 26293
| |||||||| ||||| || |||||| | | ||| || | |||| | | ||| ||
Sbjct 624 TACCACCATCTGCAATTAATGGTTTA-GTGGTGCTATTGGCAACATCT-TGTAAAGCATT 681
Query 26294 TAACTGCCAACCACCAGTACCAAAACCTGTTTTAATCTTTGTAATACAAACTCTACCAGG 26353
||| || |||||||| |||||||| || ||||| | || ||||||||| || | || ||
Sbjct 682 TAATTGTCAACCACCTGTACCAAATCCAGTTTTTAGTTTAGTAATACAAGCTTTTCCTGG 741
Query 26354 ACCTATACCGACTTTGGTAGCATCAGCACCAGCATTTTCTAATTCTCTAACACC---TTC 26410
|| | ||| | ||| | |||||||| || |||||||| ||| ||||| | ||
Sbjct 742 GCCAACACCAAATTTAATTGCATCAGCGCCTCATTTTTCTAAATCTTTAACAGCGGTTTT 801
Query 26411 TGGCGTACCAACATTACCAGCAATAACAAAACTATCAGGTATATG-------------GG 26457
|| | | ||| ||||||||||||| |||| | | |||| || |
Sbjct 802 TGTCAT---AACGTTACCAGCAATAATAAAAGGTTTA-GTATTTGTTTTAGCAAAAGTAG 857
Query 26458 TTTTAATATGTTTAATCATGTTTATCACTGAATCTGAGTGACCATGCGCAATATCTATTG 26517
|||| ||| ||||||||| | | || | || |||||||| |||||||| || |
Sbjct 858 TTTTTATAAATTTAATCATTTCTTCCATAGCATTACTATGACCATGTGCAATATCAATAG 917
Query 26518 TAATATATTCGGGGATTA-ATTTTTCTTGAGCTAACTTTTCAATAAAATCAAATTCCGCT 26576
||||| |||| || |||| ||| |||| ||| | ||||| || || ||| ||
Sbjct 918 TAATAAATTCTGGAATTAGATTCAGTTTGA-TTAATTGTTCAAGTAACTCTTTATCCTCT 976
Query 26577 TTCTTTACACCAACTGAAATAGATGCAAATAAGCCTGAATTTTGCATATGTTTTATAAAA 26636
|| || ||||||| ||| || ||| |||| | | |||||| ||| |||||
Sbjct 977 TTTTTAACACCAATGCTAATTGAAGCATATAACTTTTGTTCATGCATACTTTTAATAAA- 1035
Query 26637 GGTATTCTTGCTTCTTCATCAAAACGATGCATGATATAAAAGTAATCATTTTCAGCAAAC 26696
| | || || || |||||| ||||| | ||||||||||| ||||| ||| |
Sbjct 1036 --TTTAATTTGATCGATATTAAAACGGTGCATTACATAAAAGTAATTATTTTTAGCCGAT 1093
Query 26697 CATTTCGCTAATTTCTCATTCATAACTGTTTGCATATTTGCAGGAACTACAGGTAGCTTG 26756
|| | ||||| | || || || | ||||||||| |||| || | |
Sbjct 1094 CAAATACATAATTCTTGGTTAATGACAGCACTCATATTTGCCGGAA-------TAATTGG 1146
Query 26757 AATTTT----TTCGGACCA---AATTGGATAGTTGTATCACATTCTGATCTACTCTCAAC 26809
|||||| | |||| | || | | | |||||||||||| || | |||
Sbjct 1147 AATTTTAAAAGTAAAACCATTTAGTTTAACACTGGTATCACATTCTTTTCGTGATTTAAC 1206
Query 26810 TATACATTTATTAGGTATTAATTGAATATCTTCATAGTCAAAT---ATTTTCA-TTTTTA 26865
||| | |||||| | |||| | ||||||||| | |||||| | |||| ||||||
Sbjct 1207 TATTCCTTTATTTGCAATTAGATTTATATCTTCAAAATCAAATTTCACATTCATTTTTTA 1266
Query 26866 TTTA 26869
||||
Sbjct 1267 TTTA 1270
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 146630989830274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |