Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_007497.1
Length=44856
Score E
Sequences producing significant alignments: (Bits) Value
seq1291 206 8e-49
seq1494 147 6e-31
seq713 143 8e-30
>seq1291
Length=542012
Score = 206 bits (228), Expect = 8e-49
Identities = 236/311 (76%), Gaps = 6/311 (2%)
Strand=Plus/Plus
Query 39254 TTCAGCAGGCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTG 39313
||| ||| |||||||| |||||||| |||||||||||||| || || ||||| ||||
Sbjct 325386 TTCTGCACCCCGCCGCCCACGCGCTTGGTCGTGTAGAACAGCACATAGGGCTTGGCCGAA 325445
Query 39314 TACGGATCGCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATACGTCTGCTGGAAG 39373
|| |||||||||||||| || ||||| ||||| | ||||||||| |||||||
Sbjct 325446 TAGGGATCGCGCAGCACCCGCACCCCCGCCCGGTCCACGATCAGATAGCCGCGCTGGAAA 325505
Query 39374 TCGCCGAAGAGAATCGGCGTCGAGTTCGCCGCCACATCCGGCATGTCCGGCACCTCGGTA 39433
|||||||| |||| | ||| |||||||||||||||||| | | ||||||
Sbjct 325506 TCGCCGAACGCGATCGACAGGCTGTTGGCCGCCACATCCGGCATGGTCTCGATCTCGGTG 325565
Query 39434 ACCGGATAGCCCGCCAGCGTCGCCGGCT-GCCCCGCTACGTACGACGGTTGCCAGAGATA 39492
|||||||||||| ||| |||||| || |||| || ||| || ||| ||||||| ||
Sbjct 325566 ACCGGATAGCCCAGCAGGCTCGCCGTCTCGCCCAGCCGCGT-CGCCGGCTGCCAGATGTA 325624
Query 39493 GTTCCCTTGGCCGTCCTTCAGCTTCCGCAC-CT-GACGCTGCGTGTTGCGGTTCATCGCG 39550
||| || | ||||||| | ||| ||||| || ||| | ||| |||||||||||| ||
Sbjct 325625 GTTGCCGTCCGCGTCCTTGAACTTGCGCACGCTGGACAC--CGTCTTGCGGTTCATCACG 325682
Query 39551 AAGCGGGCGTT 39561
|| ||| ||||
Sbjct 325683 AAACGGCCGTT 325693
>seq1494
Length=1074632
Score = 147 bits (162), Expect = 6e-31
Identities = 238/334 (71%), Gaps = 10/334 (3%)
Strand=Plus/Plus
Query 39262 GCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATC 39321
||||||||||||||||||||||||||||||||| ||||| ||||| || | ||||||||
Sbjct 546452 GCCGCCGCCGACGCGCTTCGTCGTGTAGAACAGCACGTAAGGCTTGGCGGAATACGGATC 546511
Query 39322 GCGCAGCACGCGAACCCCGATGCGGTCGATGATCAGATACGTCTGCTGGAAGTCGCCGAA 39381
||||||||| || || |||| ||||| | ||||||||| | | ||| ||||||||
Sbjct 546512 GCGCAGCACCCGCACGCCGAGCCGGTCCACGATCAGATAGCCGCGTTTGAAATCGCCGAA 546571
Query 39382 GAGAATCGGCGTCGAGTTCGCCGCCACATCCGGCATGTCCGGCACCTCGGTAACCGGATA 39441
|||| | ||| ||||| || | |||||||||||| | || | ||| |
Sbjct 546572 CGCGATCGACAGCGAATTCGCGGCGATGTCCGGCATGTCCTCGGCTTCCACCAGCGGGAA 546631
Query 39442 GCCCGCCAGCGTCGC-CGGCTGCCCCGCTACGTACGACGGTTGCCAGAGATAGTTCCCTT 39500
| ||||| || |||| |||| || || || ||| ||||| ||||| | |
Sbjct 546632 CGTCATCAGCGAGGCGCGGCCGCCCGCCTGCG-CCGGCGGCTGCCACAGATA--TGCGCC 546688
Query 39501 GGCC--GTCCTTCAGCTTCCGCACCTGACGCTGCGTGTTGCGGTTCATCGCGAAGCGGGC 39558
| || |||||| | ||| || | | |||||| |||||||||||| ||||| | |
Sbjct 546689 GCCCGTGTCCTTGAACTTGCGGATTGCAGCCTGCGTCTTGCGGTTCATCACGAAGGCGCC 546748
Query 39559 GT--TGCCCGTGAACGCGCTCGGCAGGTCGTAGA 39590
|| |||| || ||| ||| | ||| ||||||
Sbjct 546749 GTTCTGCCGGT-AACCCGC-CTTCAGCGCGTAGA 546780
>seq713
Length=1192841
Score = 143 bits (158), Expect = 8e-30
Identities = 294/421 (70%), Gaps = 17/421 (4%)
Strand=Plus/Minus
Query 39217 GCTGGCGGCGACCTTCATC-GCGCGCATCGGCTCCGGATTCAGCAGGCCGCCGCCGACGC 39275
||| ||||||| ||||||| || | || | || || | ||| |||||| ||||| |
Sbjct 1085597 GCTCGCGGCGAACTTCATCAGCTTG-ATGGCGTCGAAATCCTGCACGCCGCCACCGACAC 1085539
Query 39276 GCTTCGTCGTGTAGAACAGTACGTACGGCTTCGCCGTGTACGGATCGCGCAGCACGCGAA 39335
|||| || |||||||||| || || || ||||| | |||||||||||||||||||| |
Sbjct 1085538 GCTTGGTGGTGTAGAACAACACATAGGGTTTCGCGGAATACGGATCGCGCAGCACGCGCA 1085479
Query 39336 CCCCGATGCGGTCGATGATCAGATA-CGTCTGCTGGAAGTCGCCGAAGAGAATCGGCGTC 39394
| |||| ||| |||| |||||| || | | || |||| |||||||| |||| | |
Sbjct 1085478 CGCCGAGGCGATCGACGATCAGGTAGCCGCGGC-GGAAATCGCCGAACGCGATCGACAGC 1085420
Query 39395 GAGTTCGCCGCCACATCCGGCATGTCCGGCACCTCGGTAACCGGATAGCCCGCCAGCGTC 39454
|| || || | ||||||||||||||| | ||||| | | ||| | | |||||
Sbjct 1085419 GAATTGGCGCCGACATCCGGCATGTCCTCCGCCTCGATCAGCGGGAACGTCATCAGCGAG 1085360
Query 39455 GC-CGGCTGCCCCGCTACGTACGACGGTTGCCAGAGATAGTTCCCTTGGCCG---TCCTT 39510
|| |||| ||| || || || ||| ||||| ||||| | | |||| |||||
Sbjct 1085359 GCACGGCCGCCTGCCTGCG-CCGGCGGCTGCCACAGATA---CGCGCCGCCGGTATCCTT 1085304
Query 39511 CAGCTTCCGCACCTGACG-CTGCGTGTTGCGGTTCATCGCGAAGCGGGCGTTGCCCGTGA 39569
| ||| || | | | || ||| || ||||| |||||| |||| | |||| | | ||
Sbjct 1085303 GAACTTGCGGATC-GTCGCCTGTGTCTTGCGATTCATCACGAACACGCCGTT-CTGGCGA 1085246
Query 39570 ACGCGC-TCGGCAGGTCGTAGACCAGATCGATGATGCCGTCCGACGTGATGTCTGCCGCC 39628
|| | | ||| |||||| |||||||| | |||| |||| ||| |||||| |
Sbjct 1085245 TAGCCCGCCTTCAGCGCGTAGATCAGATCGACCAGCGCGTCGGACG-GATTGCTGCCGGC 1085187
Query 39629 G 39629
|
Sbjct 1085186 G 1085186
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 143415047077084
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |