Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_007709.1 Length=43785 Score E Sequences producing significant alignments: (Bits) Value seq97 123 7e-24 >seq97 Length=479585 Score = 123 bits (136), Expect = 7e-24 Identities = 290/437 (66%), Gaps = 12/437 (3%) Strand=Plus/Minus Query 5386 CTGCTTGGTCTGATCCCGCAGGCTACCACCTATGCTGCCCCG------ACCACCATTGCT 5439 ||||| || | ||||||||||| || ||| ||| | |||| || ||||| | Sbjct 247587 CTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCCC 247528 Query 5440 GGCGCT---ACCCGTGTTGATCAGCTGCGCCTTGCGATGTTGCAGGCCAGCCTGGCTGAG 5496 | | || ||| || |||| | || || | |||||| | |||||| |||||||| Sbjct 247527 GCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGAA 247468 Query 5497 TACCCGGCCAGCGGTATCGTTATTAACCCTATTGACTGGGCGGCGATTGAGTTGGCGAAG 5556 || ||||| | ||| ||| | | ||| ||||||||| | |||| || | |||| Sbjct 247467 TATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAG 247408 Query 5557 GACGCTAACAACCAGTATCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTGG 5616 ||| | | || || | || ||||| | | || || | | |||||||| ||| Sbjct 247407 GACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGG 247348 Query 5617 GGTCTGCCGGTGGTTGCTACCCAGGCTATGGCACCGGGTGAATTCCTGGTTGGTGCATTT 5676 ||||||||||| || | |||||||| ||||| | || | ||||| |||||||| Sbjct 247347 GGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATTC 247288 Query 5677 GACTTGGCTGCCCAGATCTTTGATCAGTGGGATGCACGAGTTGAAATCGGCTATGTAAAC 5736 | ||| ||| ||||| || || | ||| | || || || ||| ||| | ||| Sbjct 247287 AAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAAC 247228 Query 5737 ---GACGATTTCCAGCGCAATATGGTCACGGTGCTGGCGGAAGAGCGTCTGGCTCTGGTT 5793 ||||| ||| || | ||||| | || || ||||||||||| ||||||| Sbjct 247227 GAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGCC 247168 Query 5794 GTGTACCGTCCGGAAGC 5810 || || ||||| ||||| Sbjct 247167 GTCTATCGTCCAGAAGC 247151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139987908083386