Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_007709.1
Length=43785
Score E
Sequences producing significant alignments: (Bits) Value
seq97 123 7e-24
>seq97
Length=479585
Score = 123 bits (136), Expect = 7e-24
Identities = 290/437 (66%), Gaps = 12/437 (3%)
Strand=Plus/Minus
Query 5386 CTGCTTGGTCTGATCCCGCAGGCTACCACCTATGCTGCCCCG------ACCACCATTGCT 5439
||||| || | ||||||||||| || ||| ||| | |||| || ||||| |
Sbjct 247587 CTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCCC 247528
Query 5440 GGCGCT---ACCCGTGTTGATCAGCTGCGCCTTGCGATGTTGCAGGCCAGCCTGGCTGAG 5496
| | || ||| || |||| | || || | |||||| | |||||| ||||||||
Sbjct 247527 GCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGAA 247468
Query 5497 TACCCGGCCAGCGGTATCGTTATTAACCCTATTGACTGGGCGGCGATTGAGTTGGCGAAG 5556
|| ||||| | ||| ||| | | ||| ||||||||| | |||| || | ||||
Sbjct 247467 TATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAAG 247408
Query 5557 GACGCTAACAACCAGTATCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTGG 5616
||| | | || || | || ||||| | | || || | | |||||||| |||
Sbjct 247407 GACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTGG 247348
Query 5617 GGTCTGCCGGTGGTTGCTACCCAGGCTATGGCACCGGGTGAATTCCTGGTTGGTGCATTT 5676
||||||||||| || | |||||||| ||||| | || | ||||| ||||||||
Sbjct 247347 GGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATTC 247288
Query 5677 GACTTGGCTGCCCAGATCTTTGATCAGTGGGATGCACGAGTTGAAATCGGCTATGTAAAC 5736
| ||| ||| ||||| || || | ||| | || || || ||| ||| | |||
Sbjct 247287 AAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAAC 247228
Query 5737 ---GACGATTTCCAGCGCAATATGGTCACGGTGCTGGCGGAAGAGCGTCTGGCTCTGGTT 5793
||||| ||| || | ||||| | || || ||||||||||| |||||||
Sbjct 247227 GAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGCC 247168
Query 5794 GTGTACCGTCCGGAAGC 5810
|| || ||||| |||||
Sbjct 247167 GTCTATCGTCCAGAAGC 247151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139987908083386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |