Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_008584.1 Length=152372 Score E Sequences producing significant alignments: (Bits) Value seq1463 82.4 7e-11 >seq1463 Length=13329 Score = 82.4 bits (90), Expect = 7e-11 Identities = 152/219 (69%), Gaps = 18/219 (8%) Strand=Plus/Plus Query 12037 GAATTTAGCCTTTCTCATTGGAGGAGCGAACTTGTTTTTCTCGACTTTTACATGAACTTC 12096 |||||| || | ||| | ||||||||| | || ||||| | ||||| || ||| Sbjct 5888 GAATTTTGCTTCTCTAAATGGAGGAGCAACTTTATTTTTTACAACTTTAACTCTCGTTTC 5947 Query 12097 ATCTCC---AAT-TTCTCCATCTTCGTCTTTTATCGG-----CTTTTTGCGCATATTAAG 12147 || || ||| |||||| | | | ||||||| ||||| | |||| ||| Sbjct 5948 ATTACCCGTAATATTCTCCTTATCC----TTTATCGCACCAACTTTT--CTTATATCAAG 6001 Query 12148 TCTAAGAGAGGAGAAAAATTTTAAAGCTCTACCACCTGGAGTGGTTTCTGGATTTCCATA 12207 ||| | ||| | | |||||||| || | ||||| | || ||||| ||||||||||| Sbjct 6002 TCTTATAGAAGTATAGAATTTTAACGCATTCCCACCAGTGGTAGTTTCCGGATTTCCATA 6061 Query 12208 ---AACTCCTATTTTTTCACGAATTTGGTTAATAAACAT 12243 ||||||||||| |||||||||||||||||| || Sbjct 6062 TACTACTCCTATTTTCATACGAATTTGGTTAATAAATAT 6100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487453266173280