Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq1388 80.6 9e-11 >seq1388 Length=494395 Score = 80.6 bits (88), Expect = 9e-11 Identities = 97/132 (73%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 29435 CTCTTGAACTTGCAGGCGCTTGGCGAAAATGTCTGCCAGCCGCTTGAGCTTCGAAATACC 29494 ||| |||| ||||||||||||||| | || || | | || |||||| || || Sbjct 6405 CTCCTGAATCTGCAGGCGCTTGGCGTAGATCTCAACGACGCGGGCGAGCTTGCTGATGCC 6346 Query 29495 GACGACTTTGCCGCTCGGGATATAGCCGATATGGGCCGTTCCCATGATCGCCGCCATATG 29554 ||| || |||| ||||||||||| ||| |||| | || | ||||| ||||||||| Sbjct 6345 GACAACACGGCCGTTCGGGATATAGGCGACCCAGGCCTTGCCGACGATCGGCGCCATATG 6286 Query 29555 GTGTTCGCAGTG 29566 ||||||||| || Sbjct 6285 GTGTTCGCAATG 6274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167600216558288