Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_009543.1
Length=44520
Score E
Sequences producing significant alignments: (Bits) Value
seq97 98.7 3e-16
>seq97
Length=479585
Score = 98.7 bits (108), Expect = 3e-16
Identities = 285/438 (65%), Gaps = 12/438 (3%)
Strand=Plus/Minus
Query 5247 CCTGCTGGGTCTGATCCCGCAGGCTACCACCTATGCTGCCCCG------ACCACCATTGC 5300
|||||| || | ||||||||||| || ||| ||| | |||| || ||||| |
Sbjct 247588 CCTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCC 247529
Query 5301 TGGTGCT---ACCCGCGTTGATCAGCTGCGTCTTGCTATGTTGCAGGCCAGCCTGGCTGA 5357
| || ||| | |||| | || ||| | || ||| | |||||| ||||||||
Sbjct 247528 CGCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGA 247469
Query 5358 GTACAACCCTAGCGGCATTGTGATCAACCCGATTGACTGGGCGGCGATTGAGCTGGCTAA 5417
|| | | || || ||| ||||||||||||| | |||| || || ||
Sbjct 247468 ATATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAA 247409
Query 5418 GGATGCCAACAACCAGTACCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTG 5477
||| || | || ||| | || ||||| | | || || | | |||||||| ||
Sbjct 247408 GGACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTG 247349
Query 5478 GGGTCTGCCGGTGGTTGCCACCCAGGCTATGGCTCCGGGCGAATTCTTGGTTGGTGCATT 5537
|||||||||||| || | |||||||| ||||| | ||| | ||| | ||||||||
Sbjct 247348 GGGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATT 247289
Query 5538 CGACTTGGCTGCGCAAATCTTTGATCAATGGGATGCCCGCGTTGAAATTG---GCTATGT 5594
| | ||| |||||| || || || | ||| | || ||||| ||| | | | |
Sbjct 247288 CAAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAA 247229
Query 5595 TGGCGAGGATTTCCAGAGGAACATGATTACGGTCCTGGCGGAAGAGCGCCTGGCCCTGGT 5654
| || || ||| | |||| | | || |||| || |||||||| || || ||||
Sbjct 247228 CGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGC 247169
Query 5655 TGTGTACCGTCCGGAAGC 5672
|| || ||||| |||||
Sbjct 247168 CGTCTATCGTCCAGAAGC 247151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 142339866216316
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |