Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_009543.1 Length=44520 Score E Sequences producing significant alignments: (Bits) Value seq97 98.7 3e-16 >seq97 Length=479585 Score = 98.7 bits (108), Expect = 3e-16 Identities = 285/438 (65%), Gaps = 12/438 (3%) Strand=Plus/Minus Query 5247 CCTGCTGGGTCTGATCCCGCAGGCTACCACCTATGCTGCCCCG------ACCACCATTGC 5300 |||||| || | ||||||||||| || ||| ||| | |||| || ||||| | Sbjct 247588 CCTGCTCGGCATCATCCCGCAGGCAACGGCCTTTGCAGTCCCGGCTGGCACGACCATGCC 247529 Query 5301 TGGTGCT---ACCCGCGTTGATCAGCTGCGTCTTGCTATGTTGCAGGCCAGCCTGGCTGA 5357 | || ||| | |||| | || ||| | || ||| | |||||| |||||||| Sbjct 247528 CGCCACTGTGACCGGTATTGACCGCCTTCGTGTGGCGATGCTTCAGGCCGCTCTGGCTGA 247469 Query 5358 GTACAACCCTAGCGGCATTGTGATCAACCCGATTGACTGGGCGGCGATTGAGCTGGCTAA 5417 || | | || || ||| ||||||||||||| | |||| || || || Sbjct 247468 ATATCCGGCAACGGGTCACGTCCTCAGCCCGATTGACTGGACTTCGATCGAACTCCTGAA 247409 Query 5418 GGATGCCAACAACCAGTACCTGATTGGCAATGCCCGTGGCACCCTGACGCCGACCCTGTG 5477 ||| || | || ||| | || ||||| | | || || | | |||||||| || Sbjct 247408 GGACACCCAGGGCCGTTACATCATCGGCAACCCGCAGGGAACGATTGCTCCGACCCTCTG 247349 Query 5478 GGGTCTGCCGGTGGTTGCCACCCAGGCTATGGCTCCGGGCGAATTCTTGGTTGGTGCATT 5537 |||||||||||| || | |||||||| ||||| | ||| | ||| | |||||||| Sbjct 247348 GGGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGCAGGCAAGTTCCTCACCGGTGCATT 247289 Query 5538 CGACTTGGCTGCGCAAATCTTTGATCAATGGGATGCCCGCGTTGAAATTG---GCTATGT 5594 | | ||| |||||| || || || | ||| | || ||||| ||| | | | | Sbjct 247288 CAAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGCTCGCGTCGAAGTCGCAACCGAGAA 247229 Query 5595 TGGCGAGGATTTCCAGAGGAACATGATTACGGTCCTGGCGGAAGAGCGCCTGGCCCTGGT 5654 | || || ||| | |||| | | || |||| || |||||||| || || |||| Sbjct 247228 CGAAGACGACTTCATCAAGAACCTCGTCACCATCCTCGCAGAAGAGCGTCTTGCTCTGGC 247169 Query 5655 TGTGTACCGTCCGGAAGC 5672 || || ||||| ||||| Sbjct 247168 CGTCTATCGTCCAGAAGC 247151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142339866216316