Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_009816.1
Length=70579
Score E
Sequences producing significant alignments: (Bits) Value
seq712 179 2e-40
seq513 89.7 2e-13
>seq712
Length=321952
Score = 179 bits (198), Expect = 2e-40
Identities = 451/670 (67%), Gaps = 14/670 (2%)
Strand=Plus/Plus
Query 59889 GGATTGCCTCGGTTAGCTGCATCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGA 59948
|||||| | ||||| | | || |||||||| | || ||||| || ||||| |||||
Sbjct 145048 GGATTGGCGCGGTTCACCGTGTCCTCGAACATGATATAGGGATAACCGGACTCGAACTGG 145107
Query 59949 ACCTCTGCGATGGTCTGGAACAGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCA 60008
| || || | ||| || | || || || | ||| |||| | || | ||
Sbjct 145108 ATTTCCGCCAGCACCTGAAAGAACTCGCGTGCATTGATCTTCTTCTTGGTAATGCGCGCA 145167
Query 60009 TCTTTTAGCCACGTGTCG-TACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTA 60067
|| | | ||| | || || | ||||| | || | ||||| ||||| | |||||
Sbjct 145168 TCATCGA-CCAATTCCCGATATTTTTCGGTGATCGAAATCTCGGTCAGTGGCACACCGTA 145226
Query 60068 CACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCG 60127
||| | | ||||||||| ||||| ||| |||| |||| | | ||| || ||
Sbjct 145227 GACCCGCTCCACGTCATAAGGCGAGAAGAGGTACATATCCTCGTTGTTCTTCGCGAGTTC 145286
Query 60128 GAACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTC 60187
||| || | || |||| || || || || || | || || || ||||| ||||||||
Sbjct 145287 GAAGGTAATGTCTGGAATGACCACACCAAGCGACAAGGTTTTGATGCGGATTTTCTCGTC 145346
Query 60188 GGCGTTTTCACGCTTGGTATCCAG-GAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAAT 60246
|||||||||||||| || || || ||||| | ||| || || || ||||| | || ||
Sbjct 145347 CGCGTTTTCACGCTTCGTGTCGAGAAAACGC-ATGATATCCGGATGATGTGCATGCAGAT 145405
Query 60247 ATACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTA 60306
| || || || || || || | || || || || || | |||||| ||| ||| || |
Sbjct 145406 AGACAGCGCCCGCACCTTGTCGCGCGCCAAGCTGATTGGCGTAGGAAAAGGAATCCTCAA 145465
Query 60307 GAATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGC 60364
||| ||||||||| || |||| || || | ||| |||| || | ||| || || ||
Sbjct 145466 GAAGCTTCATCACCGGAATGATGCCGGATGACTG--GTTCTGGATCTGCTTGATGGGCGC 145523
Query 60365 TCCTGCCTCGCGGAGGTTGGAGAATC-CAATGCCGACTCCGCCACCACGCTTAGACAGCT 60423
|| |||||||||| |||| || | || ||| || ||||| || ||||| |||| |
Sbjct 145524 GCCCGCCTCGCGGATATTGGTGAGGCTCAGCGCC-ACGCCGCCGCCCCGCTTCGACAATT 145582
Query 60424 GGAGAG-AGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGATG 60482
| |||| | ||| || || ||||||||| |||| |||||| ||| || |
Sbjct 145583 GCAGAGCCGAATTGATGGA-GCGTCCGATGGACTCCATATTGTCCTCAACCCGCAGCAGA 145641
Query 60483 AAGCATGATACTGGCTTGCCTGCG-TCGAGAAGCCCCGCGTTGAGGAAGGTCGGAGTTGC 60541
||||| || || | | ||| ||| | ||||| |||||||| || || || ||
Sbjct 145642 AAGCAGGAAACAAGTTCGCC-GCGCTGTTTTTTTCCCGCATTGAGGAATGTAGGCGTCGC 145700
Query 60542 AGGCTGGAAG 60551
||||||| ||
Sbjct 145701 AGGCTGGTAG 145710
Score = 143 bits (158), Expect = 1e-29
Identities = 280/409 (68%), Gaps = 6/409 (1%)
Strand=Plus/Plus
Query 58398 GCGCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTACCGACTTA--GCAGAGGTTCGGA 58455
|||||| | |||||| | |||||||||||| | || | | || ||| || |
Sbjct 144040 GCGCAGGAAACGCAACCCTGCACTTCCGTGCCGGAGAGCGCCATCTGGCGCAGG--CGAA 144097
Query 58456 TGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTC 58515
||||||| | | ||| | ||||||||| ||||||||||| || ||||| || || |
Sbjct 144098 TGTAGTAGATGGTCTTGATGCCCTTCTTCCACGCGTAGATCTGTGCGCGGTTGATATCGC 144157
Query 58516 GCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAG 58575
| || || || ||||| ||||||||| || ||||||| |||||| || || | |
Sbjct 144158 GTGTCGTTGCGGTATCGCGGAAGAACAATGTCAGAGACAGGCCCTGATCGACGTGCTGCG 144217
Query 58576 ATGCTACAGCGTACATATCAATGATCGGGTTAGGTCCGATAGCGTAAGCGCTATCAATTG 58635
|| | ||||| | || |||||| | || ||||| | || ||| | |
Sbjct 144218 TCGCCGCCGCGTAAGTGTCGATGATCTTTTCCGGCCCGATCTCATAGGCGTCCTGATAGT 144277
Query 58636 ATTCTACATTCTCATTGGTCACTCCGTACTG-AGGGTAATAGACTCGACCAAGCTTACCC 58694
| || | ||| |||||||||| | ||| || || ||||| ||||| | ||| |||
Sbjct 144278 AATCGAGATTGTCATTGGTCA-TGAACGCTGCCGGATAGTAGACGCGACCGATCTTGCCC 144336
Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754
|||||||| | ||||| || | || || ||||| | ||| | |||||| |||
Sbjct 144337 TCCTTGCGGATCTCAATCTTCGACACGATCGGATGGATCGATGACGTCGAATGGTTGATG 144396
Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAA 58803
|| ||||| ||||| || || || | ||||| ||||||||||| ||||
Sbjct 144397 TAGGAGATCGAGCCTGTCGGCGGCACGGCCTGAAGGTTCTGGTTATAAA 144445
Score = 95.1 bits (104), Expect = 5e-15
Identities = 113/148 (76%), Gaps = 4/148 (3%)
Strand=Plus/Plus
Query 57382 CTGGAATTTATATCCCAAGTAATAGCCATGCACACCCTCGTCTCTCATGATAAGGCGGAT 57441
||||||||| || || | |||||||||||||||| |||| || | ||||| || |||||
Sbjct 143378 CTGGAATTTGTAACCGATGTAATAGCCATGCACAGCCTCATCACGGATGATGAGCCGGAT 143437
Query 57442 AAGGTCCGCTGTGTTGGTGAG-TTTACCTTGAGAGGCGAAGTGAAGAGGGAGATAGAAGC 57500
||| || ||||| ||||| || ||| || | | | ||| | || ||||||||||
Sbjct 143438 AAGATCGGCTGTATTGGTCAGCTTTGCCCGGCTCGAC-CAGTACATGGGCAGATAGAAGC 143496
Query 57501 CGGTATAGAACAAGAATGAT-TCCAGGA 57527
||| ||||||| |||| | | |||||||
Sbjct 143497 CGGAATAGAAC-AGAAAGCTCTCCAGGA 143523
>seq513
Length=6546
Score = 89.7 bits (98), Expect = 2e-13
Identities = 163/239 (68%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 60129 AACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCG 60188
|| || | |||||||| | ||||||| || | | |||||||| || || || ||
Sbjct 1169 AAAGTAATATCAGGAATAACTACTCCTAAAGACATTGATTTAATACGAATTTTTTCATCT 1228
Query 60189 GCGTTTTCACGCTTGGTATCCAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATAT 60248
|| ||||||||||| | ||| | || | || || || || || | || |||||
Sbjct 1229 GCATTTTCACGCTTTGAATCTAAAAATAACATAATATCTGGATGATGAACATTTAAATAA 1288
Query 60249 ACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGA 60308
|| ||||| || || || ||| ||| ||||| |||| || || || |||||| |||
Sbjct 1289 ACTGCCCCAGCACCTTGTCTTTGACCTAGTTGATTAGCATATGAAAATGAATCTTCAAGA 1348
Query 60309 ATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGACCCTTAATCGGAGCTCC 60367
|| ||||| || ||||| || || | || ||| || | ||||| ||||||||
Sbjct 1349 ATTTTCATAACTGGGATAACGCCTGTTGCTTGATTTTTAATATTTTTAATTGGAGCTCC 1407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 225723876161060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |