Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq773 100 3e-16
seq724 96.9 4e-15
>seq773
Length=230076
Score = 100 bits (110), Expect = 3e-16
Identities = 241/358 (67%), Gaps = 14/358 (4%)
Strand=Plus/Minus
Query 10835 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCA 10891
||||| ||||||||||| | | ||| || ||||| ||||| || ||||||||
Sbjct 177172 CGGTTGGTCGCCGCGATCAGGATGAT---CGATTCGTTGGCTTCAAAACCGTCCATCTCG 177116
Query 10892 GTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CGCGGGC-ATACCACCCGCA 10948
|| || || |||| ||| ||||||||||| ||||| ||| | | | |||| ||
Sbjct 177115 ACCAGCAGCTGGTTGAGGGTCTGTTCGCGTTCGTCATTACCGCCGCCGAGACCA---GCG 177059
Query 10949 CTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCA 11008
| ||| || ||||||||| || ||||| |||||||| | ||| || || ||| |
Sbjct 177058 CCGCGATGACGACCGACGGCATCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTC 176999
Query 11009 CGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACA 11068
||| ||| || || || ||||| | | || ||||| || || |||||||| ||
Sbjct 176998 TTGGCCTGTTCGAACATGTCACGGACACGGCTCGCGCCGACGCCGACGAACATTTCAACG 176939
Query 11069 AAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGC 11127
|| | | ||||| || | || ||| || || || | ||| || || | | || ||
Sbjct 176938 AAGTCCGAACCGGAA-ATGGTGAAGAACGGCACATTCGCTTCGCCTGCAACAGAGCGCGC 176880
Query 11128 GAGGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTG 11185
|| || ||||| || || || || || |||| || | ||||| || ||| ||
Sbjct 176879 CAGAAGCGTCTTACCGGTGCCGGGAGGGCCCACGAGCAGCACGCCACGCGGAATCTTG 176822
>seq724
Length=279373
Score = 96.9 bits (106), Expect = 4e-15
Identities = 331/508 (65%), Gaps = 26/508 (5%)
Strand=Plus/Minus
Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839
|| || ||| || || || || || || || ||||| ||| || | || ||||||
Sbjct 7146 GACCTGACGGTCGAAACGGCCGGGACGCAGCAGGGCCGGGTCCAGCACGTCGGGGCGGTT 7087
Query 10840 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAA 10896
|| || ||||| | | |||| ||||| || |||||||||||||| ||
Sbjct 7086 GGTGGCGGCGATCAGGATGATGT---TCTCGGAGGCTTCGAAGCCATCCATCTCGACCAG 7030
Query 10897 GAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGT 10954
|| || || | ||| || ||||| || || || || | ||| || || | |||
Sbjct 7029 CAGCTGGTTCAGGGTCTGCTCGCGCTCGTCGTTGCCG--CCGCCCAGGCCTGCGCCGCGA 6972
Query 10955 TGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGG----TTGATTTTCACG 11010
|| ||||||||||| |||||||||||||| | ||| ||||| || |||||
Sbjct 6971 TGACGGCCGACGGCGTCGATTTCATCGATGAAGATGATGCACGGAGCATTCTTTTTC--- 6915
Query 11011 GGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAA 11070
|| ||| || || || ||||| | |||| ||||| || || |||||||| || ||
Sbjct 6914 -GCTTGTTCGAACATGTCGCGGACGCGGCTGGCGCCGACGCCGACGAACATTTCGACGAA 6856
Query 11071 ATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGA 11129
| | | | | || | || |||||| ||| | |||||||||| || ||||| |
Sbjct 6855 GTCCGAACCCG-AGATCGAGAAGAAGGGCACGCCCGCCTCACCCGCGACCGCGCGGGCCA 6797
Query 11130 GGAGGGTCTTCCCCGTCCCAGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCAC 11189
| || ||||| || || || || || | || ||||| || |||||| || | |
Sbjct 6796 GCAGCGTCTTGCCGGTGCCGGGAGGGCCGACCAGCAGGGCGCCCTTGGGGATCTTGCCGC 6737
Query 11190 C---ACTTCCAAAGTAGCGCTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCAT 11246
| || || | || | || | || |||||||| |||| || | || ||| |
Sbjct 6736 CCAGACGCTGGAACTTGC---CCGGATCCTTCAGGAAGTCGACGACCTCCTGCAGTTCGT 6680
Query 11247 CCTTCGCAGCGTCGATGCCTTCAACGTC 11274
|||| || | |||| |||| | || ||
Sbjct 6679 CCTTGGCCTCATCGACGCCTGCGACATC 6652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597342407086920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |