Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_010355.1
Length=62337
Score E
Sequences producing significant alignments: (Bits) Value
seq713 122 3e-23
seq1291 118 4e-22
seq1494 100 1e-16
seq900 86.0 2e-12
>seq713
Length=1192841
Score = 122 bits (134), Expect = 3e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22422 AGGCTGCGGACATGCCGGCGGTTGGCGCGGGCGCCCTGCCCATCGCCTTCGGCAACTTCC 22481
|||| | ||||||||||| || ||||| | ||| | ||||| |||||| | ||||
Sbjct 1085386 AGGCGGAGGACATGCCGGATGTCGGCGCCAATTCGCTGTCGATCGCGTTCGGCGATTTCC 1085445
Query 22482 GCGCCGGCTACACCGTCGTGGATCGCCTGGGCATCACCGTCCTGCGCGACCCCTACTCGG 22541
|| ||||||| |||| |||||||| ||| | ||| |||||||| || || || |
Sbjct 1085446 GCCGCGGCTACCTGATCGTCGATCGCCTCGGCGTGCGCGTGCTGCGCGATCCGTATTCCG 1085505
Query 22542 CCAAGCCCTTCGTGGAGTTCTACAGCCGGAAGCGCGTCGGCGGCGACGTGGTGAACTTCG 22601
| || |||| ||| |||||||| | ||||| ||||| |||| |||| | | ||||
Sbjct 1085506 CGAAACCCTATGTGTTGTTCTACACCACCAAGCGTGTCGGTGGCGGCGTGCAGGATTTCG 1085565
Query 22602 AAGCCTTCAAGCTGATG 22618
| ||| |||||||||||
Sbjct 1085566 ACGCCATCAAGCTGATG 1085582
>seq1291
Length=542012
Score = 118 bits (130), Expect = 4e-22
Identities = 198/281 (70%), Gaps = 4/281 (1%)
Strand=Plus/Minus
Query 22340 AAGGACGGCGACGGCCAGTACATCTGGCGTCCGGGCCTGGAGGCTGG-CAAGCCGTCCAC 22398
||||||| |||||| | |||||||||| |||| | | |||||| | || || | |
Sbjct 325642 AAGGACGCGGACGGCAACTACATCTGGCAGCCGG-CGACGCGGCTGGGCGAGACGGCGAG 325584
Query 22399 CCTGCTCGGCTCCCCGGTCTATCAGGCTGCGGACATGCCGGCGGTTGGCGCGGGCGCCCT 22458
|||||| |||| |||||| || | | |||||||| || | || | |||
Sbjct 325583 CCTGCTGGGCTATCCGGTCACCGAGATCGAGACCATGCCGGATGTGGCGGCCAACAGCCT 325524
Query 22459 GCCCATCGCCTTCGGCAACTTCC-GCGCCGGCTACACCGTCGTGGATCGCCTGGGCATCA 22517
| | ||||| |||||| | |||| |||| ||||| ||||||| || ||| |
Sbjct 325523 GTCGATCGCGTTCGGCGATTTCCAGCGC-GGCTATCTGATCGTGGACCGGGCGGGGGTGC 325465
Query 22518 CCGTCCTGCGCGACCCCTACTCGGCCAAGCCCTTCGTGGAGTTCTACAGCCGGAAGCGCG 22577
|| |||||||| ||||| ||||||||||||| ||| |||||||| |||||||
Sbjct 325464 GGGTGCTGCGCGATCCCTATTCGGCCAAGCCCTATGTGCTGTTCTACACGACCAAGCGCG 325405
Query 22578 TCGGCGGCGACGTGGTGAACTTCGAAGCCTTCAAGCTGATG 22618
| ||||||| ||| |||||| || ||| ||||| |||||
Sbjct 325404 TGGGCGGCGGGGTGCAGAACTTTGACGCCATCAAGGTGATG 325364
>seq1494
Length=1074632
Score = 100 bits (110), Expect = 1e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 22429 GGACATGCCGGCGGTTGGCGCGGGCGCCCTGCCCATCGCCTTCGGCAACTTCCGCGCCGG 22488
||||||||||| | | |||| | ||| | ||||| |||||| | ||| |||
Sbjct 546611 GGACATGCCGGACATCGCCGCGAATTCGCTGTCGATCGCGTTCGGCGATTTCAAACGCGG 546552
Query 22489 CTACACCGTCGTGGATCGCCTGGGCATCACCGTCCTGCGCGACCCCTACTCGGCCAAGCC 22548
||| ||||||| || || ||| | || |||||||| || || || ||||||||
Sbjct 546551 CTATCTGATCGTGGACCGGCTCGGCGTGCGGGTGCTGCGCGATCCGTATTCCGCCAAGCC 546492
Query 22549 CTTCGTGGAGTTCTACAGCCGGAAGCGCGTCGGCGGCGACGTGGTGAACTTCGAAGCCTT 22608
| |||| |||||||| ||||||||||||||||| ||| | ||||||| ||| |
Sbjct 546491 TTACGTGCTGTTCTACACGACGAAGCGCGTCGGCGGCGGCGTTCAGGACTTCGACGCCAT 546432
Query 22609 CAAGCTGATG 22618
||||||| ||
Sbjct 546431 CAAGCTGGTG 546422
>seq900
Length=120344
Score = 86.0 bits (94), Expect = 2e-12
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 6520 GACATCAAGGAAGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGG 6579
||||| ||||| |||| | | || ||||||||| || | |||||||||||| ||||
Sbjct 63188 GACATGAAGGAGGTCTTCGCCGAGGCCAAGGGCGAGGGCTATGACGTCAAGATCCTTCGC 63129
Query 6580 CAGATCATCCGCTTGCGGAAGATGGACAAGGCCGACCGGCAGGAACAGCGCGCCATCCTC 6639
|| || | ||| | || ||| |||||||||| | || |||||| || |||||||||
Sbjct 63128 AAGGTCCTGCGCATCCGCAAGCAGGACAAGGCCAAGCGTCAGGAAGAGGACGCCATCCTG 63069
Query 6640 GA 6641
||
Sbjct 63068 GA 63067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 199349957996622
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |