Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_011055.1
Length=76312
Score E
Sequences producing significant alignments: (Bits) Value
seq931 322 2e-83
seq998 271 4e-68
seq1095 269 1e-67
seq1494 86.0 3e-12
>seq931
Length=105225
Score = 322 bits (356), Expect = 2e-83
Identities = 532/762 (70%), Gaps = 7/762 (1%)
Strand=Plus/Minus
Query 65086 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 65144
|||||||| | | ||||||| || ||||||||||| || | || | |||| ||||
Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314
Query 65145 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 65204
| | || | | |||||| ||||| || || ||| | || ||| || ||| |||||||
Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254
Query 65205 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 65264
| | |||||| || ||| |||||||| | | ||||| || ||| | ||||||||
Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194
Query 65265 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 65324
| || ||| || ||| || || | || || | || ||||| ||||| |||||
Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134
Query 65325 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 65384
||||||||||| ||||||||||| ||| || || || |||| || ||||||
Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074
Query 65385 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 65444
|| || ||||| || || |||||| |||||||| || |||||||||| || || ||
Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014
Query 65445 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCAC 65504
||| | || || || || || || ||| ||||| |||||||||| || | | |
Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954
Query 65505 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 65563
||||||| | || | || | || | |||||||| | || | |||||||||
Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895
Query 65564 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 65623
| || ||||| || || ||||| ||||||||||| || ||| |||||||||||
Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838
Query 65624 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 65683
| || || |||| |||| |||| || | | ||| | ||||||||| |||||||
Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778
Query 65684 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 65743
|| |||||| || ||||| |||||||||||| | ||||||||| |||| | | | |
Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718
Query 65744 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 65803
|| | || ||||||| || |||||||| || ||| || ||||||||| |||
Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658
Query 65804 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65845
| |||| || | ||||| ||||| |||||||| ||||
Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616
>seq998
Length=1052685
Score = 271 bits (300), Expect = 4e-68
Identities = 512/750 (68%), Gaps = 5/750 (1%)
Strand=Plus/Plus
Query 65089 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 65148
||||| ||| || ||| ||| || ||| |||| ||| |||| ||||||||||||
Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365
Query 65149 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 65208
|| || ||||| || ||||| || || ||| | || ||| || || |||||||| |
Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425
Query 65209 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65268
|| |||||| || |||| | |||| ||||||||| || || | |||||||| |
Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485
Query 65269 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65328
|| ||| |||||| || | |||| | || || | ||||| ||| ||||
Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545
Query 65329 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 65388
|| ||||| || ||||||| || || || || |||| | || | | | ||
Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605
Query 65389 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 65448
|| || || || || || || |||||||||||||| ||||| || || || || |||
Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665
Query 65449 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATC 65508
| || |||| |||||| | ||| ||||| |||||||||| || | | |||
Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725
Query 65509 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 65568
|| || |||| || | ||| |||||||| | ||| ||||||||| |||
Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782
Query 65569 GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 65628
|||||| || || ||||| ||||||||||| || ||| ||||| ||||| |||
Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842
Query 65629 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 65688
||| | || | || ||||||| | | ||||| |||| |||| |||||||| |
Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902
Query 65689 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 65748
||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| |
Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962
Query 65749 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 65807
|| ||||||| ||||| |||| | || || ||| ||||||| || | ||| |
Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021
Query 65808 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 65837
||| | || ||||||| |||||||||||
Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051
>seq1095
Length=1089284
Score = 269 bits (298), Expect = 1e-67
Identities = 505/739 (68%), Gaps = 5/739 (1%)
Strand=Plus/Minus
Query 65101 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65160
|||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| |||||
Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708
Query 65161 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65220
|| ||||| || || ||| | || ||| || || ||||| | || ||||||
Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648
Query 65221 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65280
|| |||| ||||| |||||| || || ||| | || || || | || ||| |
Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588
Query 65281 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 65340
||||| || | ||||| | || || | ||||| ||| ||| |||||||| |||
Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528
Query 65341 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 65400
|| || | || || || || |||| | || | | | || | || || |||
Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468
Query 65401 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 65459
|| || |||||||| |||||||| ||||||||||| || || || || | |||| |
Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409
Query 65460 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA 65519
||| || || || ||| ||||| |||||||||| || | | | ||| || ||||
Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349
Query 65520 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 65579
||| || | | | |||||||| | ||| ||||||||| ||| || ||| |
Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292
Query 65580 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 65639
| || |||||||| |||||||| || ||| ||||||||| || || || | || |
Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232
Query 65640 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 65699
||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || ||
Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172
Query 65700 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 65759
||| || |||||||||||||| |||||| | | | ||| ||| | || |||||||
Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112
Query 65760 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 65819
||||| | ||| || |||| |||||||||| | ||| | ||| | || |
Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052
Query 65820 GAAGTCGGGCGCCTGGTTC 65838
||||||||||||||||||
Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033
>seq1494
Length=1074632
Score = 86.0 bits (94), Expect = 3e-12
Identities = 102/137 (74%), Gaps = 6/137 (4%)
Strand=Plus/Minus
Query 58187 TGGCGGGGCTGGGGCACGGCGCTGAAACCGGCGTTCGAGCCCATCGTGGTTGCGCGCAAG 58246
||||| |||||||||||||| ||||||| | | ||||| ||| | |||||||||
Sbjct 599258 TGGCGAGGCTGGGGCACGGCCTTGAAACCATCTGTGGAGCCGATCTGTCTCGCGCGCAAG 599199
Query 58247 CCTCTCG-TAG-----GCACGGTGGCGGCGAATGTCCTGGAGCACGGCACCGGCGCGCTC 58300
||||| | ||| |||||| || ||||| ||||| | ||||| || ||||| |
Sbjct 599198 CCTCTGGATAGAAACAACACGGTCGCCGCGAACATCCTGCAACACGGAACGGGCGCCATT 599139
Query 58301 AACATCGACGCCTGCCG 58317
|| ||||| ||||||||
Sbjct 599138 AATATCGATGCCTGCCG 599122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 244069141004147
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