Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_011055.1 Length=76312 Score E Sequences producing significant alignments: (Bits) Value seq931 322 2e-83 seq998 271 4e-68 seq1095 269 1e-67 seq1494 86.0 3e-12 >seq931 Length=105225 Score = 322 bits (356), Expect = 2e-83 Identities = 532/762 (70%), Gaps = 7/762 (1%) Strand=Plus/Minus Query 65086 ACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGG-TACCCGAGGGGCCGGGT 65144 |||||||| | | ||||||| || ||||||||||| || | || | |||| |||| Sbjct 85372 ACCGGCTCGCTGGGTCTGGACATGGCGCTGGGCATCGGCGGCCTGCCTGTCGGGC-GGGT 85314 Query 65145 GGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGC 65204 | | || | | |||||| ||||| || || ||| | || ||| || ||| ||||||| Sbjct 85313 GATCGAGGTGTTCGGCCCCGAATCCTCGGGCAAGACGACCCTGGCCCTGCACACGGTGGC 85254 Query 65205 CAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCC 65264 | | |||||| || ||| |||||||| | | ||||| || ||| | |||||||| Sbjct 85253 GGAAGTCCAGAAGAAGGGCGGCGTCGCCGCCTTCGTGGACGCCGAACACGCGCTGGACCC 85194 Query 65265 TGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACAC 65324 | || ||| || ||| || || | || || | || ||||| ||||| ||||| Sbjct 85193 CGTCTATGCCCAGAAGCTGGGCGTCAATCTGGATGATCTTCTGGTGTCGCAGCCCGACAC 85134 Query 65325 TGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGT 65384 ||||||||||| ||||||||||| ||| || || || |||| || |||||| Sbjct 85133 GGGCGAGCAGGCGCTGGAGATCGTGGACACGCTGGTGCGTTCGGGCGCCGTGGACATCGT 85074 Query 65385 CGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGA 65444 || || ||||| || || |||||| |||||||| || |||||||||| || || || Sbjct 85073 GGTGGTCGACTCGGTCGCCGCCCTGACCCCGCGCGCTGAAATCGAAGGCGAGATGGGCGA 85014 Query 65445 CAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCAC 65504 ||| | || || || || || || ||| ||||| |||||||||| || | | | Sbjct 85013 CAGCCTGCCGGGTCTTCAGGCCCGTCTGATGAGCCAGGCGCTGCGCAAGCTGACCGCCTC 84954 Query 65505 CATCTCCAGCACCAACACGC-TGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCA 65563 ||||||| | || | || | || | |||||||| | || | ||||||||| Sbjct 84953 GATCTCCAAGTCGAA-ATGCATCGTCCTGTTCATCAACCAGATCCGTCACAAGATCGGCG 84895 Query 65564 ACGTGGGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCT 65623 | || ||||| || || ||||| ||||||||||| || ||| ||||||||||| Sbjct 84894 TCATG---TACGGTTCGCCGGAAACCACGACGGGCGGCAATGCGCTGAAGTTCTACGCCT 84838 Query 65624 CAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCA 65683 | || || |||| |||| |||| || | | ||| | ||||||||| ||||||| Sbjct 84837 CGGTGCGACTGGACATCCGCCGCACCGGCGCGATCAAGAACCGCGATGAGGTGGTCGGCA 84778 Query 65684 ACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGT 65743 || |||||| || ||||| |||||||||||| | ||||||||| |||| | | | | Sbjct 84777 ACACCACCCGCGTCAAGGTGGTCAAGAACAAGGTCGCCCCGCCGTTCCGCGAGGTCATCT 84718 Query 65744 TCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGT 65803 || | || ||||||| || |||||||| || ||| || ||||||||| ||| Sbjct 84717 TCGACATCATGTACGGCGAAGGCATCTCCAAGCTGGGCGAGGTCATCGACCTGGGCGTCA 84658 Query 65804 CGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACG 65845 | |||| || | ||||| ||||| |||||||| |||| Sbjct 84657 AGGCGGGCGTGATCGAGAAGGCGGGCAGCTGGTTCAGCTACG 84616 >seq998 Length=1052685 Score = 271 bits (300), Expect = 4e-68 Identities = 512/750 (68%), Gaps = 5/750 (1%) Strand=Plus/Plus Query 65089 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 65148 ||||| ||| || ||| ||| || ||| |||| ||| |||| |||||||||||| Sbjct 138306 GGCTCCCTCGGGCTCGACATCGCGCTCGGCGTCGGCGGGCTGCCGAAGGGCCGGGTGGTC 138365 Query 65149 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 65208 || || ||||| || ||||| || || ||| | || ||| || || |||||||| | Sbjct 138366 GAGATTTACGGTCCTGAATCCTCCGGCAAGACCACGCTGGCGCTGCATACGGTGGCCGAG 138425 Query 65209 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65268 || |||||| || |||| | |||| ||||||||| || || | |||||||| | Sbjct 138426 GCCCAGAAGAAGGGCGGCACCTGTGCCTTCATCGACGCCGAACATGCACTGGACCCGGTC 138485 Query 65269 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65328 || ||| |||||| || | |||| | || || | ||||| ||| |||| Sbjct 138486 TATGCCCGCAAGCTCGGCGTCAATGTCGATGAACTGCTGATTTCCCAGCCCGACCATGGC 138545 Query 65329 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTC 65388 || ||||| || ||||||| || || || || |||| | || | | | || Sbjct 138546 GAACAGGCGCTTGAGATCGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATC 138605 Query 65389 GTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGT 65448 || || || || || || || |||||||||||||| ||||| || || || || ||| Sbjct 138606 GTCGATTCGGTCGCAGCTCTTGTGCCGCGCGCCGAACTCGAGGGTGAGATGGGCGACGCG 138665 Query 65449 CACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATC 65508 | || |||| |||||| | ||| ||||| |||||||||| || | | ||| Sbjct 138666 CTGCCGGGTTTGCAGGCGCGCTTGATGAGCCAGGCGCTGCGCAAGCTGACGGCTTCGATC 138725 Query 65509 TCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTG 65568 || || |||| || | ||| |||||||| | ||| ||||||||| ||| Sbjct 138726 AACAAGTCCCACACCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGG---GTG 138782 Query 65569 GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTC 65628 |||||| || || ||||| ||||||||||| || ||| ||||| ||||| ||| Sbjct 138783 ATGTACGGCTCGCCGGAAACCACGACGGGCGGCAATGCCCTGAAATTCTATGCCTCCGTC 138842 Query 65629 CGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGC 65688 ||| | || | || ||||||| | | ||||| |||| |||| |||||||| | Sbjct 138843 CGCCTCGACATTCGCCGCATCGGCGCGATCAAGGAGCGCGACGAGGTGATCGGCAACTCC 138902 Query 65689 ACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCC 65748 ||||| || ||||| || ||||||||||| || |||||| | | | ||| ||| | Sbjct 138903 ACCCGCGTCAAGGTGGTGAAGAACAAGCTTGCGCCGCCGTTCAAGCAGGTCGAATTCGAC 138962 Query 65749 GTCGTGTACGGGGAGGGCATCTCGCGTGA-GGTCGAACTCCTCGACCTGGCCGTGTCGCA 65807 || ||||||| ||||| |||| | || || ||| ||||||| || | ||| | Sbjct 138963 ATCATGTACGGCGAGGGTGTCTC-CAAGATGGGCGAGATCCTCGATCTTGGCGTCAAGGC 139021 Query 65808 GGGCCTGGTGAAGAAGTCGGGCGCCTGGTT 65837 ||| | || ||||||| ||||||||||| Sbjct 139022 CGGCATCGTCGAGAAGTCCGGCGCCTGGTT 139051 >seq1095 Length=1089284 Score = 269 bits (298), Expect = 1e-67 Identities = 505/739 (68%), Gaps = 5/739 (1%) Strand=Plus/Minus Query 65101 CTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGC 65160 |||||| ||| || ||| |||| ||| ||||| ||| || | || ||||| ||||| Sbjct 868767 CTGGACATCGCGCTCGGCGTCGGCGGGCTCCCGAAGGGACGCATCGTTGAAATTTACGGG 868708 Query 65161 CCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAATGCGCAGAAGGCC 65220 || ||||| || || ||| | || ||| || || ||||| | || |||||| Sbjct 868707 CCGGAATCCTCGGGCAAGACCACGCTGGCGCTGCATTGTGTGGCAGAGGCACAGAAGAAG 868648 Query 65221 GGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCG 65280 || |||| ||||| |||||| || || ||| | || || || | || ||| | Sbjct 868647 GGCGGCATTTGCGCCTTCATCGATGCCGAACACGCACTCGATCCGGTCTATGCCCGCAAG 868588 Query 65281 CTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTG 65340 ||||| || | ||||| | || || | ||||| ||| ||| |||||||| ||| Sbjct 868587 CTCGGCGTCAATGTCGACGAACTGCTGATCTCGCAGCCCGACCATGGTGAGCAGGCGCTG 868528 Query 65341 GAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTG 65400 || || | || || || || |||| | || | | | || | || || ||| Sbjct 868527 GAAATAGCCGATACGCTGGTGCGCTCCGGCGCGGTGGACGTGCTGATCATCGATTCGGTG 868468 Query 65401 GCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA-GTCACGTCGGCCT 65459 || || |||||||| |||||||| ||||||||||| || || || || | |||| | Sbjct 868467 GCCGCGCTGGTGCCACGCGCCGAACTCGAAGGCGAGATGGGCGATGCGTTGCC-CGGCTT 868409 Query 65460 GCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTCCAGCACCAA 65519 ||| || || || ||| ||||| |||||||||| || | | | ||| || |||| Sbjct 868408 GCAGGCACGGCTGATGAGCCAGGCGCTGCGCAAGCTGACGGCCTCGATCAACAAGTCCAA 868349 Query 65520 CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCC 65579 ||| || | | | |||||||| | ||| ||||||||| ||| || ||| | Sbjct 868348 CACCATGGTGATTTTCATCAACCAGATCCGCATGAAGATCGGG---GTGATGTATGGCTC 868292 Query 65580 GAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGT 65639 | || |||||||| |||||||| || ||| ||||||||| || || || | || | Sbjct 868291 GCCGGAAACCACCACCGGCGGCAACGCGCTGAAGTTCTACGCTTCGGTGCGGCTCGACAT 868232 Query 65640 CCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAA 65699 ||| ||||||| | || ||||| |||| |||| ||||||||| |||||| || || Sbjct 868231 CCGCCGCATCGGCGCCATCAAGGAGCGCGACGAGGTGGTCGGCAACTCCACCCGCGTCAA 868172 Query 65700 GGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGG 65759 ||| || |||||||||||||| |||||| | | | ||| ||| | || ||||||| Sbjct 868171 GGTGGTGAAGAACAAGCTGGCACCGCCGTTCAAGCAGGTCGAATTCGACATCATGTACGG 868112 Query 65760 GGAGGGCATCTCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAA 65819 ||||| | ||| || |||| |||||||||| | ||| | ||| | || | Sbjct 868111 CGAGGGTGTGTCGAAGATGGGCGAAATCCTCGACCTCGGCGTCAAGGCCGGCATCGTCGA 868052 Query 65820 GAAGTCGGGCGCCTGGTTC 65838 |||||||||||||||||| Sbjct 868051 AAAGTCGGGCGCCTGGTTC 868033 >seq1494 Length=1074632 Score = 86.0 bits (94), Expect = 3e-12 Identities = 102/137 (74%), Gaps = 6/137 (4%) Strand=Plus/Minus Query 58187 TGGCGGGGCTGGGGCACGGCGCTGAAACCGGCGTTCGAGCCCATCGTGGTTGCGCGCAAG 58246 ||||| |||||||||||||| ||||||| | | ||||| ||| | ||||||||| Sbjct 599258 TGGCGAGGCTGGGGCACGGCCTTGAAACCATCTGTGGAGCCGATCTGTCTCGCGCGCAAG 599199 Query 58247 CCTCTCG-TAG-----GCACGGTGGCGGCGAATGTCCTGGAGCACGGCACCGGCGCGCTC 58300 ||||| | ||| |||||| || ||||| ||||| | ||||| || ||||| | Sbjct 599198 CCTCTGGATAGAAACAACACGGTCGCCGCGAACATCCTGCAACACGGAACGGGCGCCATT 599139 Query 58301 AACATCGACGCCTGCCG 58317 || ||||| |||||||| Sbjct 599138 AATATCGATGCCTGCCG 599122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244069141004147