Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq743 96.9 1e-15 >seq743 Length=263205 Score = 96.9 bits (106), Expect = 1e-15 Identities = 187/268 (70%), Gaps = 10/268 (4%) Strand=Plus/Minus Query 47008 ATGCTTGATCTCCGTGACTACCAGCGCGCCAGCCTTGACGCGCTTTACGCCTATTGGGCC 47067 ||||| || || || |||||||||| ||| ||||| ||||| |||||||| Sbjct 33669 ATGCTCGAACTGCGACCATACCAGCGCGAGGCCCTCGACGCCCTTTATTCCTATTGGAAT 33610 Query 47068 GAAGGCGGCGGGAATGGCC--TGATCGTCCTGCCGA--CGGGGGCGGGCAAGGCGCTCGT 47123 | | ||||| | ||| | ||||| |||| | ||| ||||| | || || | Sbjct 33609 AATGATGGCGGC--TCGCCGCTTATCGTT-TGCCCAACCGGCGGCGGTAAGAGC-CTGAT 33554 Query 47124 CATTGCCAAGCTCATCGAGGAATTGCTGGCCGACTATCCGGACATGCGCATCTTGAATGT 47183 ||||| | |||||| ||||||||||| || || || |||||||||||||||||||| Sbjct 33553 TATTGCTACGCTCATGCAGGAATTGCTGCGTGATTACCCAGACATGCGCATCTTGAATGT 33494 Query 47184 CACTCATGATTCGCGTCTCG-TCGCCCAGAATTTTAAGGAGTTCATTGGCCTCTCGCCGT 47242 || || | |||| | | | | | ||||| | |||||| | | ||| ||| ||| | Sbjct 33493 TACGCACG-TTCGGGAATTGCTAACGCAGAACTACAAGGAGCTTCTAGGCATCTGGCCAT 33435 Query 47243 TCGCCCCGGCTGGCATCTTCTCGGCAGG 47270 ||||||| ||||| | ||||| || || Sbjct 33434 TCGCCCCTGCTGGGTTGTTCTCAGCCGG 33407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192498973336966