Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_011103.1
Length=60195
Score E
Sequences producing significant alignments: (Bits) Value
seq743 96.9 1e-15
>seq743
Length=263205
Score = 96.9 bits (106), Expect = 1e-15
Identities = 187/268 (70%), Gaps = 10/268 (4%)
Strand=Plus/Minus
Query 47008 ATGCTTGATCTCCGTGACTACCAGCGCGCCAGCCTTGACGCGCTTTACGCCTATTGGGCC 47067
||||| || || || |||||||||| ||| ||||| ||||| ||||||||
Sbjct 33669 ATGCTCGAACTGCGACCATACCAGCGCGAGGCCCTCGACGCCCTTTATTCCTATTGGAAT 33610
Query 47068 GAAGGCGGCGGGAATGGCC--TGATCGTCCTGCCGA--CGGGGGCGGGCAAGGCGCTCGT 47123
| | ||||| | ||| | ||||| |||| | ||| ||||| | || || |
Sbjct 33609 AATGATGGCGGC--TCGCCGCTTATCGTT-TGCCCAACCGGCGGCGGTAAGAGC-CTGAT 33554
Query 47124 CATTGCCAAGCTCATCGAGGAATTGCTGGCCGACTATCCGGACATGCGCATCTTGAATGT 47183
||||| | |||||| ||||||||||| || || || ||||||||||||||||||||
Sbjct 33553 TATTGCTACGCTCATGCAGGAATTGCTGCGTGATTACCCAGACATGCGCATCTTGAATGT 33494
Query 47184 CACTCATGATTCGCGTCTCG-TCGCCCAGAATTTTAAGGAGTTCATTGGCCTCTCGCCGT 47242
|| || | |||| | | | | | ||||| | |||||| | | ||| ||| ||| |
Sbjct 33493 TACGCACG-TTCGGGAATTGCTAACGCAGAACTACAAGGAGCTTCTAGGCATCTGGCCAT 33435
Query 47243 TCGCCCCGGCTGGCATCTTCTCGGCAGG 47270
||||||| ||||| | ||||| || ||
Sbjct 33434 TCGCCCCTGCTGGGTTGTTCTCAGCCGG 33407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 192498973336966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |