Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_012742.1
Length=44080
Score E
Sequences producing significant alignments: (Bits) Value
seq97 334 2e-87
>seq97
Length=479585
Score = 334 bits (370), Expect = 2e-87
Identities = 570/822 (69%), Gaps = 11/822 (1%)
Strand=Plus/Minus
Query 4735 ACCACTAATGCTGATGGCTCTGCCGGTGCAACTGTGCAGACTACCCGCCTGCCGGGCATC 4794
||||| || || | || || | || || | || ||||| || ||||| |||||||||
Sbjct 247971 ACCACGAACGCCGCCGGTTCCGTTGGCGCTGCAGTCCAGACCACTCGCCTTCCGGGCATC 247912
Query 4795 CTGGAGCTGCCGCAGCGTCGTATGACTGTTCGTAACCTGTTGGCTCAGGGCACGATGGAC 4854
|| || ||||| ||||| ||| | || | ||| ||||| | | |||||| |||||||
Sbjct 247911 CTTGAACTGCCTCAGCGCCGTCTTACGATCCGTGACCTGCTTTCGCAGGGCCAGATGGAC 247852
Query 4855 GGTAATTCGCTGGAATATGTCCGCGAGACCGGTTTCACCAATGCTGCCGCCCCGGTTGCT 4914
|| |||||||||||| ||| || | || |||| ||| || || ||||| |||
Sbjct 247851 GGCGGTTCGCTGGAATACGTCAAGGAAAAGGGCTTCAACAACAACGCTGCTCCGGTGGCT 247792
Query 4915 GAAGGTGCCCAGAAGCCGGAATCCAGCCTGCGATTTGACTTGGTGCAGACCAGCGCGAAA 4974
|||||||| ||||| | || | | | ||||| |||| |||| || ||
Sbjct 247791 GAAGGTGCTGCAAAGCCCGGTTCTGACATCCAGTTTGAACTGGTCACGACCTCTGCCAAG 247732
Query 4975 GTGATCGCCCACTACATGAAGGCATCCCGCCAGATTCTCAGTGACAGCTCCCAGTTGCAG 5034
|| ||||| |||| |||||||||||||| ||| | || |||| |||||| | |
Sbjct 247731 GTCATCGCACACTGGATGAAGGCATCCCGTCAGGTGCTGTCCGACATTTCCCAGCTTCGT 247672
Query 5035 AGCTTCATCAATGCTCGCTTGCTGCGAGGTCTGGAAGTGGTCGAAGAGGCACAGCTGCTG 5094
||||| || || ||||| ||||||| ||||||||| ||||| ||
Sbjct 247671 TCGATCATCGATCAGCGTCTGCTGTACGGTCTGGCCTATGTCGAAGAGAACCAGCTTCTC 247612
Query 5095 AATGGTAATGGCACCGGCCAGAACCTGGCTGGCCTGCTGCCCGCTG-CTACTGCCTTCAC 5153
||||| |||||||||||||||||||| ||| | | ||||| | | || ||||| |
Sbjct 247611 AATGGCGATGGCACCGGCCAGAACCTGCTCGGCATCAT-CCCGCAGGCAACGGCCTTTGC 247553
Query 5154 CG---CGCCTATCAC-----TGTT-GCCAATGCCACGGCGGTTGACCGTCTGCGTCTGGC 5204
| || || ||| || |||| || || | ||||||| || ||| ||||
Sbjct 247552 AGTCCCGGCTGGCACGACCATGCCCGCCACTGTGACCGGTATTGACCGCCTTCGTGTGGC 247493
Query 5205 GATCCTGCAGGCTCAGCTGGCTGAGTTCCCGGCGACCGGCATTGTGCTGAACCCGGCGGA 5264
||| || ||||| |||||||| | ||||| || || || || | |||| ||
Sbjct 247492 GATGCTTCAGGCCGCTCTGGCTGAATATCCGGCAACGGGTCACGTCCTCAGCCCGATTGA 247433
Query 5265 TTGGGCTGGCATTGAGCTGATTAAGGATACGCAGGGCCGCTACATCTTGGGTAACCCTCA 5324
||| || || || || | ||||| || |||||||| |||||| | || ||||| ||
Sbjct 247432 CTGGACTTCGATCGAACTCCTGAAGGACACCCAGGGCCGTTACATCATCGGCAACCCGCA 247373
Query 5325 GGGTGTCTTGGCTCCCACGCTGTGGGGTCTGCCAGTTGTCTCGACTCAGGCCATGGCCGC 5384
||| | ||||| || || ||||||||||| |||||| |||| ||||||||||||||
Sbjct 247372 GGGAACGATTGCTCCGACCCTCTGGGGTCTGCCGGTTGTCACGACCCAGGCCATGGCCGC 247313
Query 5385 AGGTCAGTTCCTCGTTGGCGCGTTTGATGCGGCTGCACAGATTTTCGATCGTTGGGAAGC 5444
||| |||||||| || || || | || ||| ||||||||||| || ||| | ||
Sbjct 247312 AGGCAAGTTCCTCACCGGTGCATTCAAGCTGGGTGCGCAGATTTTCGACCGCTGGCAGGC 247253
Query 5445 GCGCGTGGAAGTGGCTACCGAGAATCAGGATGACTTTGTGAAAAACCTTGTCACCGTTCT 5504
||||| ||||| || |||||||| | || ||||| | || ||||| |||||| | ||
Sbjct 247252 TCGCGTCGAAGTCGCAACCGAGAACGAAGACGACTTCATCAAGAACCTCGTCACCATCCT 247193
Query 5505 GTGTGAAGAGCGTTTGGCATTGGCCATCTATAGGCCTGAGGC 5546
||||||||| | || ||||| ||||| | || || ||
Sbjct 247192 CGCAGAAGAGCGTCTTGCTCTGGCCGTCTATCGTCCAGAAGC 247151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 140931891279596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |