Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq1095 80.6 7e-11 >seq1095 Length=1089284 Score = 80.6 bits (88), Expect = 7e-11 Identities = 111/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 || |||||||| |||| |||||| ||||||||||||| | || | ||||||| Sbjct 360147 GCCAAGGAACTGAACGTCCCGATCGTCGCGCTGTCGCAATTGTCGCGTCAGGTCGAGAAC 360088 Query 8938 CGCCCAAACAAGCGGCCCGTCA-TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGA 8996 ||| |||||| ||||| | | |||| || || || || || ||||||| ||||| Sbjct 360087 CGCGACGACAAGC-GCCCGCAACTCGCCGACCTTCGTGAATCCGGCTCGATCGAACAGGA 360029 Query 8997 TGCCGACGTGATCCTCTTTATCTACCGCGATGA 9029 |||||||| || |||| |||| ||||| || Sbjct 360028 CGCCGACGTCGTCGTCTTCGTCTATCGCGAGGA 359996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127543329608604