Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq890 91.5 2e-13
seq1318 89.7 6e-13
seq949 82.4 9e-11
>seq890
Length=125401
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/82 (87%), Gaps = 2/82 (2%)
Strand=Plus/Plus
Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGGA-GGCTTTCACC-TCGCTAGTTTTCAAGACTA 31348
||||| ||||||||||||||||||||| |||| ||||| ||||| ||||||||||| |
Sbjct 24467 GCGGAAGCGGTGGGATTCGAACCCACGGACGGCTCTCACCGTCGCTGGTTTTCAAGACCA 24526
Query 31349 GAGCCTTCAACCACTCGACCAC 31370
| ||||| ||||||||| ||||
Sbjct 24527 GTGCCTTAAACCACTCGGCCAC 24548
>seq1318
Length=12988
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 32020 GTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTA 32078
||||||||||||||||||||| || ||||||||||| ||||||||||||| ||||||||
Sbjct 1762 GTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACTGAGCTA 1820
>seq949
Length=99569
Score = 82.4 bits (90), Expect = 9e-11
Identities = 62/72 (86%), Gaps = 2/72 (3%)
Strand=Plus/Plus
Query 176127 AGGGAG--GGATTTGAACCCCCGTAGGCAGAGCCAGCGGATTTACAGTCCGCCTCCATTA 176184
|||||| ||||||||||| |||||||| ||||| ||||||||||||||| | || |||
Sbjct 1419 AGGGAGTTGGATTTGAACCAACGTAGGCATAGCCAACGGATTTACAGTCCGTCCCCTTTA 1478
Query 176185 ACCACTCGGACA 176196
||||||||| ||
Sbjct 1479 ACCACTCGGGCA 1490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622113142936560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |