Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq773 86.0 8e-12 >seq773 Length=230076 Score = 86.0 bits (94), Expect = 8e-12 Identities = 238/358 (66%), Gaps = 14/358 (4%) Strand=Plus/Minus Query 12750 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTT---ATCGAAGCCATCCATCTCA 12806 ||||| ||||||||||| | |||| || ||||| || || || |||||||| Sbjct 177172 CGGTTGGTCGCCGCGAT---CAGGATGATCGATTCGTTGGCTTCAAAACCGTCCATCTCG 177116 Query 12807 GTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCGGGC-ATACCACCCGCA 12863 || || || |||| ||| ||||| ||||| ||||| ||| | | | |||| || Sbjct 177115 ACCAGCAGCTGGTTGAGGGTCTGTTCGCGTTCGTCATTACCGCCGCCGAGACCA---GCG 177059 Query 12864 CTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCA 12923 | ||| || ||||||||| || |||||||| ||||| | ||| || || ||| | Sbjct 177058 CCGCGATGACGACCGACGGCATCGATTTCGTCGATGAAGATGATGCAAGGCGCATTCTTC 176999 Query 12924 CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACA 12983 ||| ||| || || || || || | | || ||||| || || ||||| || || Sbjct 176998 TTGGCCTGTTCGAACATGTCACGGACACGGCTCGCGCCGACGCCGACGAACATTTCAACG 176939 Query 12984 AAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGC 13042 || | | ||||| || | || ||| || || || | ||| || || | | || || Sbjct 176938 AAGTCCGAACCGGAA-ATGGTGAAGAACGGCACATTCGCTTCGCCTGCAACAGAGCGCGC 176880 Query 13043 GAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTG 13100 || || ||||| || || || || ||| |||| || | ||||| || ||| || Sbjct 176879 CAGAAGCGTCTTACCGGTGCCGGGAGGGCCCACGAGCAGCACGCCACGCGGAATCTTG 176822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613495704408840