Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq79 132 6e-26
seq114 113 6e-20
seq812 109 7e-19
seq1290 89.7 7e-13
>seq79
Length=12267
Score = 132 bits (146), Expect = 6e-26
Identities = 370/549 (67%), Gaps = 23/549 (4%)
Strand=Plus/Plus
Query 11235 TTCT-TCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTA-CGATCAAATCTACCG 11292
|||| ||||| || | | |||||||||||||| | ||| | | || ||||| | |||
Sbjct 1628 TTCTCTCACGCCCATTTATATCAGGTAAAGAAA-TAGTAATCTGTCGGTCAAAACGACCA 1686
Query 11293 GGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAATT 11352
|| | | || || || || | || |||||| |||||| | || | | |
Sbjct 1687 GGTCTAAGTAGTGCTGGATCTAGGACGTCTGGACGGTTAGTTGCAGCAATTATTATCA-- 1744
Query 11353 TCAGTTTCATT---CTCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCA 11409
|| |||||| ||||||||||||||| || | ||| ||||| | |||||||||
Sbjct 1745 -CACCTTCATTAGACTCGAAACCATCCATCTCAACCAGTAACTGGTTTAATGTTTGTTCC 1803
Query 11410 CGCTCATCGTTTGCCGCAAACCCATTC--ATACTTCTTTTCTTACCAATCGCATCAATTT 11467
| || ||||| |||| | || | | || | | | | |||| | ||||| ||||
Sbjct 1804 CTTTCGTCGTTA-CCGCCA-CCAAGACCGATGCCGCGATGCCTACCTACTGCATCTATTT 1861
Query 11468 CATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAAT-TCAAATATATCACGGACT 11526
| ||||| || || ||||| || ||||| | | || ||||| ||||| |||||
Sbjct 1862 CGTCTATGAAAATTATACAAGGAGCATTTTT-CTTACCTTGATCAAACATATCCCGGACA 1920
Query 11527 CTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGACCCCG-AACACTGAATAAA 11585
| |||| || || || ||||||||||||||||| || || | || ||| || |||
Sbjct 1921 CGGCTTGCACCAACACCGACAAACATTTCAACGAAATCAGATCCAGAAATACT-AAAAAA 1979
Query 11586 AGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTTTTACCTGTACCTGGTTT 11645
|| || || |||||| || || ||||| || | || |||||||| || || ||
Sbjct 1980 CGGTACATTAGCTTCACCTGCAATTGCACGAGCAAGTAGAGTTTTACCAGTTCCAGGGGA 2039
Query 11646 ACCTGTTAATAATGCA-CCCCTTGGTATTTTAGCACCGGTACCAAAGTACTTTTCTGGC- 11703
||| |||| || ||| || ||||||| || |||| || || | ||| || |
Sbjct 2040 ACCAATTAA-AAGGCATCCTTTTGGTATCTTCCCACC--TAACACTTGAAATTTTTGCCT 2096
Query 11704 -GCCTTGAGAAAATCAACAATTTCTTCGAGCTCATCTTTCGCGCTATCTATACCCTGAAC 11762
|| ||||||||||||||||| | | ||| ||||| || ||| || || |||
Sbjct 2097 TTGTTTAAGAAAATCAACAATTTCAACCAACTCTTCTTTTGCTTCATCAATCCCAGCAAC 2156
Query 11763 ATCATCAAA 11771
|||||||||
Sbjct 2157 ATCATCAAA 2165
>seq114
Length=11559
Score = 113 bits (124), Expect = 6e-20
Identities = 184/261 (70%), Gaps = 17/261 (7%)
Strand=Plus/Minus
Query 11233 ATTTCTTCACGTCCGTGAACATCAGGTAAAGAAACTTGTATTTTACGATCAAATCTACCG 11292
||| |||||||| | | || ||||||| || | |||| |||||||||||||||
Sbjct 8401 ATTGCTTCACGTTCTTTAATATCAGGTCAACTTAAAGAAATTTGACGATCAAATCTACCT 8342
Query 11293 GGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCACCTATAACAACAATT 11352
|| ||||||||||| || || |||| ||| |||||| || ||| | |||| || || |
Sbjct 8341 GGACGTAATAACGCTTCATCAAGTACATCAGCACGGTTAGTGGCAGCCATAATAATAACT 8282
Query 11353 TC--AGTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCAC 11410
| |||| | | || | ||||||||||| |||||||||||| | ||||||
Sbjct 8281 CCCAAGTT--AGTTTCATATCCATCCATTTCAACTAATAATTGGTTTAAAGTTTGT---- 8228
Query 11411 GCTCATCGTTTGCCG--CAAACCCATTCATACTTCTTTTCTTACCAATCGCATCAATTTC 11468
|||| |||| | |||| | | | ||||||| || | |||||||||||
Sbjct 8227 --TCATTAGTTGCAGTTGAAAC----TGAGGCACGTTTTCTT-CCTACTGCATCAATTTC 8175
Query 11469 ATCTATAAAGATAATACACGG 11489
||| ||||| |||||||| ||
Sbjct 8174 ATCAATAAAAATAATACAAGG 8154
>seq812
Length=1388629
Score = 109 bits (120), Expect = 7e-19
Identities = 140/188 (74%), Gaps = 4/188 (2%)
Strand=Plus/Minus
Query 7597 CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTT 7656
||| ||||||||||| || | || |||||||| || || || || || || || || ||
Sbjct 467799 CTTGTCGAGACCGTAGGCCAGCGCGGCCGCCGTCGGCTCGTTGATGATGCGCAG-CACTT 467741
Query 7657 C-AGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
| || || || || |||||| | || || || || || || || | ||||| ||||||
Sbjct 467740 CGAGACCGGCGATC-TTGCCGGCGTCCTTGGTGGCCTGACGCTGGGCGTCGTTGAAGTAG 467682
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
||||| || || | |||||| | | ||| |||| ||||||| || ||||||| | |||
Sbjct 467681 GCCGGCACGGTGATGACCGCCTGCTCGACCTTCTGGCCGAGATGCGCTTCCGCGGTCTCT 467622
Query 7775 TTCATTTT 7782
||||||||
Sbjct 467621 TTCATTTT 467614
>seq1290
Length=26696
Score = 89.7 bits (98), Expect = 7e-13
Identities = 219/328 (67%), Gaps = 8/328 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||| || ||||| |||| | || || || ||||| || || || |||| ||
Sbjct 2958 TCGAAGTCCTCACCGCCCAGGAAGGTGTCGCCGTTGGTCGACTTCACCTCGAAGACGCCG 2899
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| | || | | | ||| || || || || || || ||||||||| | | | ||
Sbjct 2898 TCGCCGATCTCCAGGATCGAGACGTCGAAGGTGCCGCCGCCCAGGTCATAGACGG---CG 2842
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| | | | |||| |||||| || || || || || | ||| ||||| || || ||
Sbjct 2841 ATCTTCTGGCCGTC---GTTCTTCTCCAGGCCATAGGCCAAAGCAGCCGCGGTCGGCTCG 2785
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCG 7695
|| || || || || | |||||| || || |||||| | || || || || || ||
Sbjct 2784 TTGATGATGCGCAGGACTTCCAGGCCGGCGATC-TTGCCGGCGTCCTTGGTGGCCTGACG 2726
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||||||||| || | ||| || | ||| || |||| || ||
Sbjct 2725 CTGGCTGTCGTTGAAGTAGGCCGGGACGGTGATGACGGCCTGCGTCACCTTCTCGCCCAG 2666
Query 7756 ATACGATTCCGCGATATCTTTCATTTTG 7783
||| | ||| ||| || ||||| |||
Sbjct 2665 ATAGGCTTCGGCGGCTTCCTTCATCTTG 2638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635120899199160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |