Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq773 95.1 1e-14 seq724 91.5 2e-13 >seq773 Length=230076 Score = 95.1 bits (104), Expect = 1e-14 Identities = 215/316 (68%), Gaps = 8/316 (3%) Strand=Plus/Minus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAG 11649 || ||||||||||| || || |||||||||| |||||||| || || || || | Sbjct 177133 TCAAAACCGTCCATCTCGACCAGCAGCTGGTTGAGGGTCTGTTCGCGTTCGTCATTACCG 177074 Query 11650 G-GC--ATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACG 11706 || | |||| | |||| || | |||||| || || || || |||||||| | | Sbjct 177073 CCGCCGAGACCAGC-GCCG--CGATGACGACCGACGGCATCGATTTCGTCGATGAAGATG 177017 Query 11707 ATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACA 11766 || || || || ||||||||||| | ||||| ||||| |||| || || Sbjct 177016 ATGCAAGGCGCATTCTTCTTGGCCTGTTCGAACATGTCACGGACACGGCTCGCGCCGACG 176957 Query 11767 CCTACGAACATCTCAACGAAGTTTGCGGCAG-AACACTGAATGAAGGGAACATTAGACTC 11825 || |||||||| |||||||||| | | | || |||| ||| || ||||| | || Sbjct 176956 CCGACGAACATTTCAACGAAGTCCGAACCGGAAATGGTGAA-GAACGGCACATTCGCTTC 176898 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885 || || | | || || || || |||||||| || || || | || |||| || | Sbjct 176897 GCCTGCAACAGAGCGCGCCAGAAGCGTCTTACCGGTGCCGGGAGGGCCCACGAGCAGCAC 176838 Query 11886 GCCACGGGGGATCTTG 11901 |||||| || |||||| Sbjct 176837 GCCACGCGGAATCTTG 176822 >seq724 Length=279373 Score = 91.5 bits (100), Expect = 2e-13 Identities = 256/389 (66%), Gaps = 18/389 (5%) Strand=Plus/Minus Query 11590 TCGAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAG 11649 ||||| || ||||| || || |||||||| | ||||| || ||||| |||||| | Sbjct 7052 TCGAAGCCATCCATCTCGACCAGCAGCTGGTTCAGGGTCTGCTCGCGCTCGTCGTTGCCG 6993 Query 11650 GGCATACCA--CCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 | ||| ||||| || | ||||| ||||| || ||||||||||| | || Sbjct 6992 --CCGCCCAGGCCTGCGCCGCGATGACGGCCGACGGCGTCGATTTCATCGATGAAGATGA 6935 Query 11708 TACACGG----TTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCA 11763 | ||||| || || | || |||||||| | || || || || | || || Sbjct 6934 TGCACGGAGCATTCTTTTTC----GCTTGTTCGAACATGTCGCGGACGCGGCTGGCGCCG 6879 Query 11764 ACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAATGAAGGGAACATTAGAC 11823 || || |||||||| || ||||||| | | || | | |||||| || | | Sbjct 6878 ACGCCGACGAACATTTCGACGAAGTCCGAACCCGAGATCGAGAAGAAGGGCACGCCCGCC 6819 Query 11824 TCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGG 11883 ||||| |||| || || || || || ||||| || || || || | || | || ||| Sbjct 6818 TCACCCGCGACCGCGCGGGCCAGCAGCGTCTTGCCGGTGCCGGGAGGGCCGACCAGCAGG 6759 Query 11884 GCGCCACGGGGGATCTTGGCACC---ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAG 11940 ||||| |||||||||| | || || || | || | || | ||| |||||| Sbjct 6758 GCGCCCTTGGGGATCTTGCCGCCCAGACGCTGGAACTTGC---CCGGATCCTTCAGGAAG 6702 Query 11941 TCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 || || | ||||| ||||| |||||||| Sbjct 6701 TCGACGACCTCCTGCAGTTCGTCCTTGGC 6673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588964964062200