Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_014901.1 Length=59230 Score E Sequences producing significant alignments: (Bits) Value seq743 107 7e-19 >seq743 Length=263205 Score = 107 bits (118), Expect = 7e-19 Identities = 143/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 47383 CTGCGTGTGTTGAAACCCGGTGGGCACCT-GCTCGCCTTCGGCGGCACCCGCACCTGGCA 47441 ||||| ||| ||||||| || |||||| | ||| || ||||||| | ||| || || Sbjct 30929 CTGCGCGTGCTGAAACCTGGCGGGCACGTCGCT-GCGTTCGGCGCATCGCGCGGCTATCA 30871 Query 47442 CCGGCTGGCGGCGGCGATCGAGGACGCCGGGTTCGAGCTCCGCGACTCGATCGCCTGGCT 47501 ||| ||||| |||||||| || || ||||| || ||||||||||| || ||| | Sbjct 30870 CCGCATGGCGTGCGCGATCGAAGATGCGGGGTTTGAAATCCGCGACTCGCTCATGTGGAT 30811 Query 47502 GTACGGCAGCGGGTTCCCGAAGTCGCTCGACGTGTCCAAGGCCATCGACAAGGCCGCTGG 47561 || || | ||||| |||||||||| || ||| ||||| || || || || || || Sbjct 30810 TTATGGGACGGGGTTTCCGAAGTCGCATGATGTGAGCAAGGGGATTGATAAAGCGGCGGG 30751 Query 47562 TGCTGAGCGCGAGGTG 47577 ||| || || |||||| Sbjct 30750 TGCGGAACGTGAGGTG 30735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189411028305296