Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_015279.1
Length=190789
Score E
Sequences producing significant alignments: (Bits) Value
seq890 109 7e-19
seq763 96.9 4e-15
seq1318 93.3 5e-14
seq1095 89.7 6e-13
seq1494 86.0 8e-12
>seq890
Length=125401
Score = 109 bits (120), Expect = 7e-19
Identities = 78/90 (87%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 141675 TAGGGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGT 141734
|| ||||| |||| ||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct 24557 TAAGGAAGTGTGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCGACGGTGAGAGC 24498
Query 141735 TCTCCGTGGGTTCAAATCCCACCTCTTCCG 141764
||||||||||| ||||||||| ||||||
Sbjct 24497 CGTCCGTGGGTTCGAATCCCACCGCTTCCG 24468
>seq763
Length=251843
Score = 96.9 bits (106), Expect = 4e-15
Identities = 77/93 (83%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 141237 AGATAAGTGTAGTGCCATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTC 141296
|||||||| || || |||| | ||||||||| || ||||| | ||||||||||||| |
Sbjct 72907 AGATAAGTCCAGAGCAGTTCCGCGGTAGCTCAGTGGTAGAGCAGCCGACTGTTAATCGGC 72848
Query 141297 TGGTCGTAGGTTCAAATCCTACCTGGGGAGTCA 141329
||||||||||||| ||||||||| | |||| ||
Sbjct 72847 TGGTCGTAGGTTCGAATCCTACCCGCGGAGCCA 72815
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313
|||| | ||||||||| || ||||| | ||||||||||||| |||||||||||||| |||
Sbjct 73023 TTCCGCGGTAGCTCAGTGGTAGAGCAGCCGACTGTTAATCGGCTGGTCGTAGGTTCGAAT 72964
Query 141314 CCTACCTGGGGAGTCA 141329
|||||| | |||| ||
Sbjct 72963 CCTACCCGCGGAGCCA 72948
>seq1318
Length=12988
Score = 93.3 bits (102), Expect = 5e-14
Identities = 59/64 (92%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 140960 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTAC 141019
||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||
Sbjct 1821 GTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTCGAATCCTAC 1762
Query 141020 CTGG 141023
| ||
Sbjct 1761 CGGG 1758
>seq1095
Length=1089284
Score = 89.7 bits (98), Expect = 6e-13
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737
||||| |||| ||||||||||| ||||| ||||||||||||| ||| | |||||
Sbjct 503358 GGAAGGGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCCCGCAAGGGTA 503417
Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764
|||||||||| ||||||||| ||||||
Sbjct 503418 CCGTGGGTTCGAATCCCACCCCTTCCG 503444
>seq1494
Length=1074632
Score = 86.0 bits (94), Expect = 8e-12
Identities = 71/87 (82%), Gaps = 0/87 (0%)
Strand=Plus/Plus
Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737
||||| ||| ||||||||||| || || ||||||||||||| ||| | ||||||
Sbjct 128867 GGAAGGGTGTCCGAGTGGTTTAAGGAACCGGTCTTGAAAACCGGCGTGCCTGCAAGGGTA 128926
Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764
|||||||||| ||||||||| ||||||
Sbjct 128927 CCGTGGGTTCGAATCCCACCCCTTCCG 128953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 610385362689960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |