Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq890 109 7e-19 seq763 96.9 4e-15 seq1318 93.3 5e-14 seq1095 89.7 6e-13 seq1494 86.0 8e-12 >seq890 Length=125401 Score = 109 bits (120), Expect = 7e-19 Identities = 78/90 (87%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 141675 TAGGGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGT 141734 || ||||| |||| ||||||||||| |||||||||||||||||||||||| |||| || Sbjct 24557 TAAGGAAGTGTGGCCGAGTGGTTTAAGGCACTGGTCTTGAAAACCAGCGACGGTGAGAGC 24498 Query 141735 TCTCCGTGGGTTCAAATCCCACCTCTTCCG 141764 ||||||||||| ||||||||| |||||| Sbjct 24497 CGTCCGTGGGTTCGAATCCCACCGCTTCCG 24468 >seq763 Length=251843 Score = 96.9 bits (106), Expect = 4e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 141237 AGATAAGTGTAGTGCCATTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTC 141296 |||||||| || || |||| | ||||||||| || ||||| | ||||||||||||| | Sbjct 72907 AGATAAGTCCAGAGCAGTTCCGCGGTAGCTCAGTGGTAGAGCAGCCGACTGTTAATCGGC 72848 Query 141297 TGGTCGTAGGTTCAAATCCTACCTGGGGAGTCA 141329 ||||||||||||| ||||||||| | |||| || Sbjct 72847 TGGTCGTAGGTTCGAATCCTACCCGCGGAGCCA 72815 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 141254 TTCCTCAGTAGCTCAGCGGCAGAGCCGACGACTGTTAATCGTCTGGTCGTAGGTTCAAAT 141313 |||| | ||||||||| || ||||| | ||||||||||||| |||||||||||||| ||| Sbjct 73023 TTCCGCGGTAGCTCAGTGGTAGAGCAGCCGACTGTTAATCGGCTGGTCGTAGGTTCGAAT 72964 Query 141314 CCTACCTGGGGAGTCA 141329 |||||| | |||| || Sbjct 72963 CCTACCCGCGGAGCCA 72948 >seq1318 Length=12988 Score = 93.3 bits (102), Expect = 5e-14 Identities = 59/64 (92%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 140960 GTAGCTCAGTTGGATAGAGCAACTGCCTTCTAAGCAGTCGGTCGTAGGTTCGAGTCCTAC 141019 ||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||||| Sbjct 1821 GTAGCTCAGTTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCGTAGGTTCGAATCCTAC 1762 Query 141020 CTGG 141023 | || Sbjct 1761 CGGG 1758 >seq1095 Length=1089284 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737 ||||| |||| ||||||||||| ||||| ||||||||||||| ||| | ||||| Sbjct 503358 GGAAGGGTGGCCGAGTGGTTTAAGGCACCGGTCTTGAAAACCGGCGTGCCCGCAAGGGTA 503417 Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764 |||||||||| ||||||||| |||||| Sbjct 503418 CCGTGGGTTCGAATCCCACCCCTTCCG 503444 >seq1494 Length=1074632 Score = 86.0 bits (94), Expect = 8e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 141678 GGAAGAGTGGTCGAGTGGTTTATGGCACTGGTCTTGAAAACCAGCGAGGGTGCAAGTTCT 141737 ||||| ||| ||||||||||| || || ||||||||||||| ||| | |||||| Sbjct 128867 GGAAGGGTGTCCGAGTGGTTTAAGGAACCGGTCTTGAAAACCGGCGTGCCTGCAAGGGTA 128926 Query 141738 CCGTGGGTTCAAATCCCACCTCTTCCG 141764 |||||||||| ||||||||| |||||| Sbjct 128927 CCGTGGGTTCGAATCCCACCCCTTCCG 128953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 610385362689960