Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_015937.1 Length=151483 Score E Sequences producing significant alignments: (Bits) Value seq1463 87.8 2e-12 >seq1463 Length=13329 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/218 (70%), Gaps = 16/218 (7%) Strand=Plus/Plus Query 11938 GAATTTAGCCTTTCTCATTGGAGGAGCAAACTTAtttttttCTACTTTTATATGAACCTC 11997 |||||| || | ||| | ||||||||||| ||||||||| | ||||| | || Sbjct 5888 GAATTTTGCTTCTCTAAATGGAGGAGCAACTTTATTTTTTACAACTTTAACTCTCGTTTC 5947 Query 11998 ATCTCC---AATCTCTCCATCCTCGTCTTTTATTGG-----CTTTTTGCGCATATTAAGT 12049 || || ||| | || |||| || ||||| | ||||| | |||| |||| Sbjct 5948 ATTACCCGTAATAT-TC--TCCTTATCCTTTATCGCACCAACTTTT--CTTATATCAAGT 6002 Query 12050 CTAAGAGATGAAAAGAATTTTAATGCCCTACCACCTGGTGTTGTTTCCGGGTTTCCATAA 12109 || | ||| | | |||||||||| || | ||||| | || |||||||| |||||||| Sbjct 6003 CTTATAGAAGTATAGAATTTTAACGCATTCCCACCAGTGGTAGTTTCCGGATTTCCATAT 6062 Query 12110 ACT---CCTATTTTTTCACGAATTTGGTTGATAAACAT 12144 ||| |||||||| |||||||||||| ||||| || Sbjct 6063 ACTACTCCTATTTTCATACGAATTTGGTTAATAAATAT 6100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484608519477720