Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq890 125 2e-24 seq743 93.3 1e-14 seq1482 87.8 6e-13 >seq890 Length=125401 Score = 125 bits (138), Expect = 2e-24 Identities = 139/184 (76%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 ||||||| || ||||||||||| || ||||| ||||| ||| | ||||| |||||||||| Sbjct 47312 ACGGAAAACTCAGCTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGT 47253 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTC---GGACTGA 24936 |||| ||||| |||||| |||||||||| | | | || |||| || || ||| Sbjct 47252 TCAACATCGCCTCCTACGCCCTGCTGACCC---TGATGGTGGCCCAGGTCGTGGGTCTGG 47196 Query 24937 AGGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGC 24996 || ||||| ||| || ||| |||||||| |||||||||| |||||| | || | Sbjct 47195 AGCCGGGCGAGTTCGTCCATACCTTCGGCGACGCCCACCTGTATCTGAACCATCTGGAAC 47136 Query 24997 AGGC 25000 |||| Sbjct 47135 AGGC 47132 >seq743 Length=263205 Score = 93.3 bits (102), Expect = 1e-14 Identities = 135/188 (72%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 ||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| | Sbjct 73060 TGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCGTCC 73001 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT--CGGA-CTGAAGGTCGGCGAATTC 24950 || ||||||||||| | |||| ||| | |||| || | ||||| ||| Sbjct 73000 TATGCGCTGCTGACGATGATGATCGC---ACAGGTGACGGATCTTGCGCCGGGCGATTTC 72944 Query 24951 ATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAA 25010 ||| || |||||||| || |||||||| ||||| | ||||||||| | ||| Sbjct 72943 ATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCGCCTGCAA 72884 Query 25011 CTGTCGCG 25018 ||| |||| Sbjct 72883 CTGACGCG 72876 >seq1482 Length=483770 Score = 87.8 bits (96), Expect = 6e-13 Identities = 72/88 (82%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879 |||| || ||| ||||||||||| |||||| ||| || || |||||||||||||||| Sbjct 421844 ACGGCAAACTGTCGTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCCGT 421903 Query 24880 TCAATATCGCGAGCTACGCGCTGCTGAC 24907 |||| ||||| ||| ||||||||||| Sbjct 421904 TCAACATCGCATCCTATGCGCTGCTGAC 421931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164169877621552