Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_016655.1
Length=51342
Score E
Sequences producing significant alignments: (Bits) Value
seq890 125 2e-24
seq743 93.3 1e-14
seq1482 87.8 6e-13
>seq890
Length=125401
Score = 125 bits (138), Expect = 2e-24
Identities = 139/184 (76%), Gaps = 6/184 (3%)
Strand=Plus/Minus
Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879
||||||| || ||||||||||| || ||||| ||||| ||| | ||||| ||||||||||
Sbjct 47312 ACGGAAAACTCAGCTGCCAGCTGTATCAGCGTAGCGCCGACATCTTCCTGGGCGTGCCGT 47253
Query 24880 TCAATATCGCGAGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTC---GGACTGA 24936
|||| ||||| |||||| |||||||||| | | | || |||| || || |||
Sbjct 47252 TCAACATCGCCTCCTACGCCCTGCTGACCC---TGATGGTGGCCCAGGTCGTGGGTCTGG 47196
Query 24937 AGGTCGGCGAATTCATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGC 24996
|| ||||| ||| || ||| |||||||| |||||||||| |||||| | || |
Sbjct 47195 AGCCGGGCGAGTTCGTCCATACCTTCGGCGACGCCCACCTGTATCTGAACCATCTGGAAC 47136
Query 24997 AGGC 25000
||||
Sbjct 47135 AGGC 47132
>seq743
Length=263205
Score = 93.3 bits (102), Expect = 1e-14
Identities = 135/188 (72%), Gaps = 6/188 (3%)
Strand=Plus/Minus
Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893
||||||||||| ||||| || ||||| || ||||||||||||||||| |||||| |
Sbjct 73060 TGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCGTCC 73001
Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCT--CGGA-CTGAAGGTCGGCGAATTC 24950
|| ||||||||||| | |||| ||| | |||| || | ||||| |||
Sbjct 73000 TATGCGCTGCTGACGATGATGATCGC---ACAGGTGACGGATCTTGCGCCGGGCGATTTC 72944
Query 24951 ATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAA 25010
||| || |||||||| || |||||||| ||||| | ||||||||| | |||
Sbjct 72943 ATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCGCCTGCAA 72884
Query 25011 CTGTCGCG 25018
||| ||||
Sbjct 72883 CTGACGCG 72876
>seq1482
Length=483770
Score = 87.8 bits (96), Expect = 6e-13
Identities = 72/88 (82%), Gaps = 0/88 (0%)
Strand=Plus/Plus
Query 24820 ACGGAAAGCTGAGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGT 24879
|||| || ||| ||||||||||| |||||| ||| || || ||||||||||||||||
Sbjct 421844 ACGGCAAACTGTCGTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGGCGTGCCGT 421903
Query 24880 TCAATATCGCGAGCTACGCGCTGCTGAC 24907
|||| ||||| ||| |||||||||||
Sbjct 421904 TCAACATCGCATCCTATGCGCTGCTGAC 421931
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164169877621552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |