Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq890 104 2e-17 >seq890 Length=125401 Score = 104 bits (114), Expect = 2e-17 Identities = 179/260 (69%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 29807 GTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29866 |||||| || | ||| || | ||| ||||| || | ||| ||||| ||||| ||||| | Sbjct 47136 GTTCCAGATGGTTCAGATACAGGTGGGCGTCGCCGAAGGTATGGACGAACTCGCCCGGCT 47195 Query 29867 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29926 | || || ||| || |||| ||| || || || | |||| ||||||||| || | Sbjct 47196 CCAGACCCACGACCTGGGCCACCATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACG 47255 Query 29927 GTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGC 29986 | || || || ||||| | | ||| || ||||| || ||| | |||||| Sbjct 47256 GCACGCCCAGGAAGATGTCGGCGCTACGCTGATACAGCTGGCAGCTGAGTTTTCCGTCTG 47315 Query 29987 TCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGG 30046 ||| | ||||| ||| | ||||||||| || || |||||| | ||| ||| | Sbjct 47316 CGACGAAGAACTGGAACAGGCAGTGGCACGGCGGCAGGGCCATGTCGTCCACGTCCGCCG 47375 Query 30047 GGTTCCAGGCGCACACGATG 30066 |||||||||||| |||||| Sbjct 47376 GGTTCCAGGCGCTGACGATG 47395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408610134939527