Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_017974.1
Length=149273
Score E
Sequences producing significant alignments: (Bits) Value
seq827 91.5 1e-13
seq998 89.7 5e-13
seq1168 84.2 2e-11
>seq827
Length=173386
Score = 91.5 bits (100), Expect = 1e-13
Identities = 58/63 (92%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 146803 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAG 146862
||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 172452 CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGAGGTTCGAA 172511
Query 146863 TCC 146865
|||
Sbjct 172512 TCC 172514
>seq998
Length=1052685
Score = 89.7 bits (98), Expect = 5e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 146803 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAG 146862
||| ||||||||||||| ||||||||| ||| || |||| ||| ||||||| |||||||
Sbjct 846742 CGGAGTATAGCGCAGCCCGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGCAGGTTCGAA 846683
Query 146863 TCCAGCTACACCGACCA 146879
||| ||||| |||||||
Sbjct 846682 TCCTGCTACTCCGACCA 846666
>seq1168
Length=41007
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 144372 GCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGATT 144431
|| || |||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct 8995 GCCGGCTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGATT 9054
Query 144432 CCTGCATCCAGCACCA 144447
|||||| || ||||||
Sbjct 9055 CCTGCAGCCGGCACCA 9070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477536651989320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |