Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq827 91.5 1e-13 seq998 89.7 5e-13 seq1168 84.2 2e-11 >seq827 Length=173386 Score = 91.5 bits (100), Expect = 1e-13 Identities = 58/63 (92%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 146803 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAG 146862 ||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 172452 CGGGGTGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGAGGTTCGAA 172511 Query 146863 TCC 146865 ||| Sbjct 172512 TCC 172514 >seq998 Length=1052685 Score = 89.7 bits (98), Expect = 5e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 146803 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAG 146862 ||| ||||||||||||| ||||||||| ||| || |||| ||| ||||||| ||||||| Sbjct 846742 CGGAGTATAGCGCAGCCCGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGCAGGTTCGAA 846683 Query 146863 TCCAGCTACACCGACCA 146879 ||| ||||| ||||||| Sbjct 846682 TCCTGCTACTCCGACCA 846666 >seq1168 Length=41007 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 144372 GCTGGATTAGCTCAGTAGGTAGAGCGCCTCACTTGTAATGAGGATGTCGCGGGTTCGATT 144431 || || |||||||||| ||||||||||| |||||| ||||||||||||||||||| Sbjct 8995 GCCGGCTTAGCTCAGTTGGTAGAGCGCCAGTTTTGTAAACTGGATGTCGCGGGTTCGATT 9054 Query 144432 CCTGCATCCAGCACCA 144447 |||||| || |||||| Sbjct 9055 CCTGCAGCCGGCACCA 9070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477536651989320