Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_017981.1
Length=49981
Score E
Sequences producing significant alignments: (Bits) Value
seq1494 84.2 7e-12
>seq1494
Length=1074632
Score = 84.2 bits (92), Expect = 7e-12
Identities = 191/283 (67%), Gaps = 16/283 (6%)
Strand=Plus/Minus
Query 26004 GCCGTCCTTTTCC---CACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACC 26060
||||||||| ||| ||||| ||||| | || ||||| |||||||||| | ||
Sbjct 774 GCCGTCCTTGTCCTGCCACTTCCGGGTCTGGAGCGCGCCCTCGATGTAAACCTTGGCGCC 715
Query 26061 TTTCTTCAGGTACTCGCCCGCGATCT-------CCGCTACCTTGCCAAACAGCACGACGC 26113
|||||||| |||| |||||| || || || | ||| || | |||||||
Sbjct 714 CTTCTTCAGATACTGCTCCGCGACCTTGCAAAGCCCCT-CATTG---AAAATGACGACGC 659
Query 26114 GATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGG 26173
||||||| || ||| ||| || ||||||||| | ||| || |||| | || || |
Sbjct 658 GATGCCACTCGGTCTTTTCCTTGCGTTCGCCGGTGTTCTTGTCACGCCAGGTCTCGGACG 599
Query 26174 TCGCTACGGTAATGTTGGCGACTGCGCCG-CCATTAGGCATGTAACGGATCTCTGGATCG 26232
|||| | | | | ||||||| | |||| || | | || ||||| || ||||||
Sbjct 598 TCGCGATGCTGAGATTGGCGA-TCGGCCGCCCGTCCTGGGTGCGCCGGATATCGGGATCG 540
Query 26233 TTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCCGCGTG 26275
||| || || || || || || || || || |||| || ||
Sbjct 539 GCCCCGAGATTGCCCACCAGAATGACCTTGTTGACGCTGCCTG 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159814755146834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |