Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq1494 84.2 7e-12 >seq1494 Length=1074632 Score = 84.2 bits (92), Expect = 7e-12 Identities = 191/283 (67%), Gaps = 16/283 (6%) Strand=Plus/Minus Query 26004 GCCGTCCTTTTCC---CACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACC 26060 ||||||||| ||| ||||| ||||| | || ||||| |||||||||| | || Sbjct 774 GCCGTCCTTGTCCTGCCACTTCCGGGTCTGGAGCGCGCCCTCGATGTAAACCTTGGCGCC 715 Query 26061 TTTCTTCAGGTACTCGCCCGCGATCT-------CCGCTACCTTGCCAAACAGCACGACGC 26113 |||||||| |||| |||||| || || || | ||| || | ||||||| Sbjct 714 CTTCTTCAGATACTGCTCCGCGACCTTGCAAAGCCCCT-CATTG---AAAATGACGACGC 659 Query 26114 GATGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGG 26173 ||||||| || ||| ||| || ||||||||| | ||| || |||| | || || | Sbjct 658 GATGCCACTCGGTCTTTTCCTTGCGTTCGCCGGTGTTCTTGTCACGCCAGGTCTCGGACG 599 Query 26174 TCGCTACGGTAATGTTGGCGACTGCGCCG-CCATTAGGCATGTAACGGATCTCTGGATCG 26232 |||| | | | | ||||||| | |||| || | | || ||||| || |||||| Sbjct 598 TCGCGATGCTGAGATTGGCGA-TCGGCCGCCCGTCCTGGGTGCGCCGGATATCGGGATCG 540 Query 26233 TTCCCCAGGTTACCGACAAGGATTACTTTATTTACGCCGCGTG 26275 ||| || || || || || || || || || |||| || || Sbjct 539 GCCCCGAGATTGCCCACCAGAATGACCTTGTTGACGCTGCCTG 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159814755146834