Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_018281.1
Length=43581
Score E
Sequences producing significant alignments: (Bits) Value
seq741 98.7 3e-16
>seq741
Length=4446
Score = 98.7 bits (108), Expect = 3e-16
Identities = 141/196 (72%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 36923 AGAAGTTGAAAAGATTTCTCGTGATTTAAAAATTATAGCTAAAGAAACAGGTTGTATCA- 36981
||||||| ||| ||||||||| |||||||||| | || | |||| | | ||| ||
Sbjct 650 AGAAGTTTCAAATATTTCTCGTAGTTTAAAAATTTTGGCAAGAGAATTAAGA-GTACCAA 592
Query 36982 TTATCGCACTATCTCAATTAAGTAGAGGCGTAGAAAGTCGTAGTGATAAACGTCCGATGA 37041
|| | |||| |||||| ||| || || || ||| || |||||||| | |
Sbjct 591 TTGTTTGTTTATCACAATTATCAAGAATGGTGGAGAGACGTGAAGAAAAACGTCCTTTAA 532
Query 37042 TGTCTGATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTAT 37101
||||||||||| | || |||| | ||||| ||||| || |||| ||| | || ||||
Sbjct 531 TGTCTGATTTACGTGAGTCAGGGGCTATTGAACAAGATGCTGATATAATTATGTTTTTAT 472
Query 37102 ACCGTGATGATTATTA 37117
| ||||||||||||||
Sbjct 471 ATCGTGATGATTATTA 456
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139335119703634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |