Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_018281.1 Length=43581 Score E Sequences producing significant alignments: (Bits) Value seq741 98.7 3e-16 >seq741 Length=4446 Score = 98.7 bits (108), Expect = 3e-16 Identities = 141/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 36923 AGAAGTTGAAAAGATTTCTCGTGATTTAAAAATTATAGCTAAAGAAACAGGTTGTATCA- 36981 ||||||| ||| ||||||||| |||||||||| | || | |||| | | ||| || Sbjct 650 AGAAGTTTCAAATATTTCTCGTAGTTTAAAAATTTTGGCAAGAGAATTAAGA-GTACCAA 592 Query 36982 TTATCGCACTATCTCAATTAAGTAGAGGCGTAGAAAGTCGTAGTGATAAACGTCCGATGA 37041 || | |||| |||||| ||| || || || ||| || |||||||| | | Sbjct 591 TTGTTTGTTTATCACAATTATCAAGAATGGTGGAGAGACGTGAAGAAAAACGTCCTTTAA 532 Query 37042 TGTCTGATTTAAGAGAAGCAGGAGGAATTGAGCAAGACGCGAATATGATTTTCTTCTTAT 37101 ||||||||||| | || |||| | ||||| ||||| || |||| ||| | || |||| Sbjct 531 TGTCTGATTTACGTGAGTCAGGGGCTATTGAACAAGATGCTGATATAATTATGTTTTTAT 472 Query 37102 ACCGTGATGATTATTA 37117 | |||||||||||||| Sbjct 471 ATCGTGATGATTATTA 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139335119703634