Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_018282.1
Length=61167
Score E
Sequences producing significant alignments: (Bits) Value
seq1045 96.9 1e-15
seq713 82.4 3e-11
>seq1045
Length=73698
Score = 96.9 bits (106), Expect = 1e-15
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 33750 ATGGACCTGACGGCGACTCACCTGAACGGTTGCCCGCTCCGCCTGAAGGACCTCCTGGAG 33809
||||||||||||||| ||||| ||||| || |||||| ||| | ||| | |
Sbjct 55998 ATGGACCTGACGGCGGCTCACGCCAACGGCTGTCCGCTCGATCTGGCGCGCCTGGCGACG 56057
Query 33810 GCGGATGACCTCAACTTCGCCCATGACGTGGGCGGGATCGCGCGTCACATCGACCGCACC 33869
||||| || ||||| | || || |||||| ||| ||||| || |||||||||||| |
Sbjct 56058 GCGGACAACTTCAACCTGGCGCACGACGTGTTCGGCATCGCCCGCCACATCGACCGCCGC 56117
Query 33870 ACCGGGAAGCTCACCCGCTGCTTCCTGCCCCGCTTC 33905
||||| ||||| | || ||||| |||||||||
Sbjct 56118 ACCGGCAAGCTGGGCGACTTCTTCCGCCCCCGCTTC 56153
>seq713
Length=1192841
Score = 82.4 bits (90), Expect = 3e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 5616 GAGGAGTTCGACTATGGATATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAAC 5675
|| || |||||||| || |||| || ||||||||||||||||||||||| |||||| ||
Sbjct 112874 GACGAATTCGACTACGGTTATGTACTGACCGTCCACAAGTCGCAGGGCTCGCAGTGGGAC 112815
Query 5676 AACGTCCTGCTGTTTGATGA 5695
|||| ||||||| || ||
Sbjct 112814 GACGTAGTGCTGTTCGACGA 112795
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 195609317969902
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |