Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq1045 96.9 1e-15 seq713 82.4 3e-11 >seq1045 Length=73698 Score = 96.9 bits (106), Expect = 1e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 33750 ATGGACCTGACGGCGACTCACCTGAACGGTTGCCCGCTCCGCCTGAAGGACCTCCTGGAG 33809 ||||||||||||||| ||||| ||||| || |||||| ||| | ||| | | Sbjct 55998 ATGGACCTGACGGCGGCTCACGCCAACGGCTGTCCGCTCGATCTGGCGCGCCTGGCGACG 56057 Query 33810 GCGGATGACCTCAACTTCGCCCATGACGTGGGCGGGATCGCGCGTCACATCGACCGCACC 33869 ||||| || ||||| | || || |||||| ||| ||||| || |||||||||||| | Sbjct 56058 GCGGACAACTTCAACCTGGCGCACGACGTGTTCGGCATCGCCCGCCACATCGACCGCCGC 56117 Query 33870 ACCGGGAAGCTCACCCGCTGCTTCCTGCCCCGCTTC 33905 ||||| ||||| | || ||||| ||||||||| Sbjct 56118 ACCGGCAAGCTGGGCGACTTCTTCCGCCCCCGCTTC 56153 >seq713 Length=1192841 Score = 82.4 bits (90), Expect = 3e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 5616 GAGGAGTTCGACTATGGATATGCGCTCACCGTCCACAAGTCGCAGGGCTCCCAGTGGAAC 5675 || || |||||||| || |||| || ||||||||||||||||||||||| |||||| || Sbjct 112874 GACGAATTCGACTACGGTTATGTACTGACCGTCCACAAGTCGCAGGGCTCGCAGTGGGAC 112815 Query 5676 AACGTCCTGCTGTTTGATGA 5695 |||| ||||||| || || Sbjct 112814 GACGTAGTGCTGTTCGACGA 112795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195609317969902