Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq1121 105 2e-17 >seq1121 Length=1158 Score = 105 bits (116), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 133904 TTGAAAAATAATCCTGATTCTCGACGTCATATTCTAACTGCATGGAATGTTGGTGAACTA 133963 || ||||| |||||| ||| ||| | || ||| || | | ||| ||| || ||| | Sbjct 876 TTAAAAAACAATCCTTTTTCACGAAGACACATTTTATCAGTATGAAATCCTGCAGAAATT 935 Query 133964 GATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCAATTCTTCGTAAATGACGGTAAG 134023 | || ||| | | |||||||||||| || | |||||| | ||| ||| | ||| Sbjct 936 AAAAATATGGCACTACCACCATGTCATACTTTAATTCAATTTTACGTTTCTGATGATAAA 995 Query 134024 ---TTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCATTCAAC 134080 ||||| ||| ||||||||||||| ||| | || |||||||| || || || Sbjct 996 AAATTATCTTGTCAATTATATCAACGTAGTGCAGATATTTTTTTAGGAGTTCCTTTTAAT 1055 Query 134081 ATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGG 134127 |||||||| ||| ||||| |||| |||||||||||| | ||||| Sbjct 1056 ATTGCTTCTTATGCATTATTAACAATAATGTTAGCACAAATATGTGG 1102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147568359450502