Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq752 434 2e-116
seq1179 224 1e-53
>seq752
Length=262051
Score = 434 bits (480), Expect = 2e-116
Identities = 761/1081 (70%), Gaps = 53/1081 (5%)
Strand=Plus/Minus
Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCTGGTCTTCCAGCGTGAAGGCGGC-CTTGG 139563
||||||||||||||| |||| || || ||||| || | ||||||| |||| |||||
Sbjct 252540 GCGGCACTCGACGCCAGCGGTGGCGCGGACGTGGTCCTCGACCGTGAAG-CGGCGCTTGG 252482
Query 139564 CGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGT 139623
| |||| || ||||||||| || |||||||||||||| | |||||| || || |
Sbjct 252481 CCTCGGTCCGGCTCATGGTCCGACCGGCGCCGTGCGAGCAGGTGCAGAAGCTTTCCGCAT 252422
Query 139624 TGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAACT 139683
|||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| | |
Sbjct 252421 TGCCCTTGCCGCGCACGATGAAGGACTTCGCCCCCATCGATCCGGGGATGATGCCCAGTT 252362
Query 139684 GGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGA 139743
| | | || ||||||| |||||| || ||||||| |||||| || | |||| ||
Sbjct 252361 CGCCGTCCTTGGCCGACATCGCGCCTTTTCGGGTCAGGAAGACATCCTTGCCGAAATGCT 252302
Query 139744 ACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAAGGGCG 139803
|||||| |||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 252301 TTTCCTTCGAGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTGCGTCGTCTCCAGATCCG 252242
Query 139804 GCAGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCC 139863
|| | | ||| || | | || ||| | |||||||| |||||||||| |
Sbjct 252241 GCCAGAC---GGCCTTCAGCACCCCAAGCACCTGATCCATCATCACCTCGCGGTTGGCGC 252185
Query 139864 GCGCGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGC--TCGCC 139921
|||| | | ||| |||| | || || || |||||| ||| ||| | || ||
Sbjct 252184 GCGCATATTTCTGCGCCCACGACACCGCCCGGACATAGTCGATGAA-GCCGTCCGTC-CC 252127
Query 139922 TTCCGACAGCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCCCGACGCAGCATCAT 139981
||||| | | || ||||||| || || | | ||| || || || |||||
Sbjct 252126 TTCCGGGAAATAGGCCAGGTCCTGATCCGGCAGGT--TGA-TGTGCCAGCGGCGCATCTC 252070
Query 139982 CTCCTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCG 140040
| ||||||| |||||||| ||| | ||||| | |||||||| |||||||| || |
Sbjct 252069 GTGCTTGGCCCGTTCGATGAA-ATAGGTGCCGAAGCGATTGCCGACACCGCGCGAACCGG 252011
Query 140041 AGTGGAGCATCACCCAGAC-GCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTG 140099
|||| |||||||||||||| ||| | |||| || ||||| | ||||||||||||||||
Sbjct 252010 AGTGCAGCATCACCCAGACATCGCCCG-CCTCATCAAGGCACAGCTCGATGAAGTGGTTG 251952
Query 140100 CCGCCGCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCTTGTACTTG 140159
||| |||||| |||||||| ||| ||| || | ||| || | | ||||
Sbjct 251951 CCGGTGCCCAGGGTGCCCAGATGGCCGAAGCCG--CGCG-----GATG--CGCCGCCTTG 251901
Query 140160 TCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCG------AGTCGACCCACTTGCGCATG 140213
| | | ||| | | ||| || ||||| ||| |||| ||| ||
Sbjct 251900 GGGTGGCG---CTCCACCACGGCGTCATAGCCCGCCTTAAGGTCAGCCCA---GCGGGTG 251847
Query 140214 A---TCGAGTTCG--GGAT--GCCGC---TACGCCCGT-TCCAGCCGCCCGACGGACCCG 140262
| ||| || || | ||||| ||||| | || |||||| || ||
Sbjct 251846 ACCGCCGAAGCCGGAGGCTCCGCCGCCCAGGCGCCCTTGTCGTTGCGCCCGCCGTTGTCG 251787
Query 140263 G-CCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCG--AGGCTGTCGG 140319
| | ||||||||| |||||| |||||| ||| | || | | | || ||| ||| |
Sbjct 251786 GTGCGGCCGTGCGGAACGGCGGCCTCGAT-GGCG-GAGCGGATGGCCGACAGGTCGTCAG 251729
Query 140320 GCAGGTCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGC 140379
|||||| | |||| | |||||| ||||| ||||||||||||||||||||||||||||
Sbjct 251728 GCAGGTGCTCGGCCCGGATCGAGGTCCGCACCGCCATCATGCCGCAGCCGATGTCCACGC 251669
Query 140380 CCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGA 140439
||||||| || || ||||| || ||| |||||||||||| || ||||| |||| || |
Sbjct 251668 CCACGGCGGCGGGAATGATCGCCCCCACGGTCGGGATCACGGAACCCACCGTCGCCCCCA 251609
Query 140440 TGCCCATGTGGACGTCCGGCATCAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCGA 140499
||||| ||| ||||| ||||| | || ||||| |||||||||||||| | ||| |
Sbjct 251608 TGCCCCAGTGCACGTCGGGCATGACCGCGACATGTTTATGGATGAACGGCAGCGAGGCCA 251549
Query 140500 GGTTGTGCGCCTGCACCTGGGCGGGCTGCTCGAAGGTCACACCCCGGACCCAGGCCTTGA 140559
||| | | ||| | | || | | ||||| || ||| || ||| |||||||||||
Sbjct 251548 CGTTCTTCAGCTGTTTCAGCGCCGCATCCTCGATGGGCACGCCTCGGGTCCAGGCCTTGA 251489
Query 140560 T 140560
|
Sbjct 251488 T 251488
>seq1179
Length=40310
Score = 224 bits (248), Expect = 1e-53
Identities = 550/835 (66%), Gaps = 63/835 (8%)
Strand=Plus/Plus
Query 84363 TGGCGTCGTGCGGGTGGAAGACGTTCAGGGACTGGCCCTGGCAGATGTCCTCCGTCCGCC 84422
|| ||||| ||| ||| | |||||| |||||| |||||||||| ||| || ||
Sbjct 7697 TGACGTCGCCGGGGATGAACAGGTTCAGCGACTGGGCCTGGCAGATTTCCGGCGCGCGGT 7756
Query 84423 CGACGGCCAGCCGCACGACCCAGCGCTGGTCGAGTTCCATCGCCGTCTTGTAGACGCGCT 84482
|| ||||||| || |||||||||||||| ||||| | || |||||| | |||| ||
Sbjct 7757 CGGCGGCCAGTTCGACCACCCAGCGCTGGTCCAGTTCGAAGGCGGTCTTGAACACGCCCT 7816
Query 84483 TCTTGTGGTCCAGGACCGCCGGGTCGACTTCGATGCCCAGGGCCTCGAAGAACTCGACCG 84542
||| || ||||| | |||||| |||| |
Sbjct 7817 TCTCGT---------------------CTTCGTT---CAGGGCGTCGATG---------- 7842
Query 84543 AGAAGTGCTGGATCGAGCCCTCGTTGGCGACGATGGTCTTCCAGACCTCATCGGTGTCGG 84602
||||| | |||||| |||| | | ||| | |||||||| | ||||||| |
Sbjct 7843 -----TGCTGAACCGAGCCTTCGTGCTCCAGGATCGAGTTCCAGACGGCCTCGGTGTTGA 7897
Query 84603 CGCCCAGGCTCGCCAGCCACGCGCGC-AGCCAGCGGTTCTTGACCTGGAACGAACCCGAG 84661
|||| |||| | || |||| | || || ||||||||||| |||||| |||||
Sbjct 7898 TGCCCTT-CTCGTCGAGCAGGCGCTCCAGATAGGGGTTCTTGACCGCGAACGAGCCCGAC 7956
Query 84662 AGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGGGCTCGATCGACGGCGAAGCGCCGCCG 84721
|||||||||||| || ||||||| || | |||||||| || || | |||||||
Sbjct 7957 AGGGTCTTGTGCGTATAGATGTTGGCCGGGATCGGCTCGATGCCCGCAGACGTGCCGCCG 8016
Query 84722 CAGAGGATCGACGAGGAGGCGTTGGGGGCCACCGCCAGCTTGTGGGCGAAGCGCT----- 84776
|||| |||||| |||||| | ||||| | |||||||||||| ||| ||||
Sbjct 8017 CAGATGATCGAGATCGAGGCGGTTGGGGCGATGGCCAGCTTGTGGCTGAACCGCTCCATG 8076
Query 84777 -CGCC-CGAGCCT-----TCCATGTCAGGGGCCTCGCCGCGCTCGGCGCCCAGGACCAGC 84829
|||| || ||| |||| | |||| | || ||| || ||||| ||
Sbjct 8077 ACGCCGCGGTCCTGAGCGTCCA-GGCAGG-----CCCCCTTCTCTTCGGCCAGG--GTGC 8128
Query 84830 GAC--GCCGCGTCGGCCTTGCGGCGCATGTGGCGGAAGATGGTCTTATTGAGCGTCTCGG 84887
| | ||| |||||||| |||||||| || ||| | | | || || || ||
Sbjct 8129 GGCTGGCCTTGTCGGCCTCGCGGCGCAGATGCTTGAACAGACGCATGTTCCACGACTTGG 8188
Query 84888 CCGCCATGCTCTCGAACGGGATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGC 84947
|| ||| ||||| | || | | | ||| || | ||||||||||||| |||||
Sbjct 8189 CCATGGCGCTTTCGAAGGCGACGCCCTGACCCTGCAGGAAGGAGTGGAAGCCCATCAGGC 8248
Query 84948 CCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTAGGAGGCCCGGTGCATCTCGTCCGGCG 85007
|||| |||||||| ||||||||| ||| ||| ||| | ||| || ||| |
Sbjct 8249 CCAGACCCACCGAACGCTCGCGCTTGGCCGAATAGACGGCGGCGGCCATGGCGGGCGGGG 8308
Query 85008 CGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGG 85067
|| || |||||| |||| || |||||||| | ||||||||||| |||||||||
Sbjct 8309 CGCGGTTGATGAAGTCCTGCAGCACATTGTCCAGGAACCGCATCAGGTCCTCGATGAAGC 8368
Query 85068 TCGGGTGATCCTTCCATTCGACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGG 85127
|| | || ||| || | | | ||||||||||| |||||||||||||||||
Sbjct 8369 GGGGCTCTTCGCGCCACTCCAGGAAGGTCTCGGCGTTGACCGACGACAGGCAGCAGACGG 8428
Query 85128 CCGTGCGCATCTTGCCGAACACGTCGCGGCCGGTGCCCAGCATGATCTCCGAGCA 85182
| ||||| | ||| | ||| ||||||| ||||||||| || | |||
Sbjct 8429 CGGTGCGGTCCACGCCCAGGTGGTCCTTGCCGGTGTGCAGCATGATTTCGGCGCA 8483
Score = 214 bits (236), Expect = 3e-50
Identities = 544/812 (67%), Gaps = 38/812 (5%)
Strand=Plus/Plus
Query 86106 CGCAGAGGTTCGACTGGCGAACGCTCAGGCCAAGCTTCTTCTGCCGGTCCGGGAAGTGGC 86165
|||| ||||||||||| || ||||||| || | ||| | || | ||||
Sbjct 8480 CGCACAGGTTCGACTGTTTGACCTTCAGGCCCAGGTCGCGCTGGTGCGGCGCCATCTGGC 8539
Query 86166 GGTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATCA 86225
|||| ||||| |||| | ||||||||||| ||||||| ||| | |||| ||
Sbjct 8540 GGTTCACCGTGTCCGAGAAGATCAGATAGGGCTCGCCGGTCTGCATGCGGATGTCGAGCA 8599
Query 86226 GCAGGCGCCACAGGTCGCGCGCCCGTTCCATGCGGATCA---CCTCGCCCGTCTTGGGCG 86282
|| | |||||| || ||| ||| | | | ||| | ||||| ||||||||
Sbjct 8600 GCTTGGTCCACAG--CGAGCGGGCGT-CGACGGTCTTCAGGACTTCGCCGTCCTTGGGCG 8656
Query 86283 AGCGCAGGGCGAAGTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGTTGA 86342
| ||| ||||| || | || |||||| ||||||||||||||||| |||||
Sbjct 8657 ACTTGAGGTCGAAGGTGGCGCCGATCTTCACCGCCTCCATGAACTCGTCGGTGATGTTGA 8716
Query 86343 CCGCATTGTGCAGGTTGGTGATCTTGCGGTTGTGGTCCCCGCCCGTCGGCTTGCGCGCGG 86402
| | |||||| || | |||||||||| ||| ||||| || |||||
Sbjct 8717 TGCCGTGGTGCAGATTCAGGGACTTGCGGTTGAAGTC---GCCCGAGGGTTTGCGGATCT 8773
Query 86403 TGATGAACTCGCGGATTTCGGGGTGGTGGATGTCCAGGTAGACGGCGTTGGAGCCCCGGC 86462
| ||| || ||| || ||||| ||||||||||| ||||||||| || || ||||
Sbjct 8774 CAAGGAATTCCTCGATCTCCGGGTGATGGATGTCCAGATAGACGGCGGCCGAACCGCGGC 8833
Query 86463 GCGTACCGCCCTGGCTGACGGCCAGGATCAGGCGGTCGTCCACCGCCATGAACGGGATGA 86522
|| |||||| | |||||| |||| ||| ||| ||||| |||||||
Sbjct 8834 GCAGCGAGCCCTGCGAAATCGCCAGGGTCAGTGAGTCCATCACGCGGATGAAGGGGATGA 8893
Query 86523 CGCC---GGTC--GACTGCGAACCCTTGGAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCC 86577
||| |||| | | ||| |||||| ||||||||| | | ||| | | ||||
Sbjct 8894 TGCCCGAGGTCTTGCCCGCG--CCCTTGAC---CTTCTCGCCGATGGAGCGGACGCCGCC 8948
Query 86578 GTAATAGGAGCCGATGCCGCCGCCCATCGACGACAGCCAGATGACCTCGT--CATA-GTG 86634
| |||| ||||||||||||||| |||| | ||| | | ||||| || | ||
Sbjct 8949 CCAGTAGGTGCCGATGCCGCCGCCGTTCGAGGCCAGGGCCACGTTCTCGTTCCAGACGTT 9008
Query 86635 CTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCC 86694
|| ||| || || ||||||| | | |||| | |||||||||||||| ||||||||
Sbjct 9009 CT-GGATGCCG--TCCAGGCTGTCGCCCACCGCGTTCAGGAAGCAGGAGATGGGCAGGCC 9065
Query 86695 ACGGGCCGAGCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGAGGTTCGAGAC 86754
||| | | |||||||||||||| | ||||| ||| ||||||||| ||| || |
Sbjct 9066 GCGGTCGGCACCGCCGTTCGACAGGACGGGGGTCGCGGGCATGAACCACAGG--CGGCTC 9123
Query 86755 GTAT--TCGTACAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCG---CG 86809
||| || || || |||||| |||| |||||||| |||| ||||| | ||| |
Sbjct 9124 ATATAGTCATAAAGGCGCTGGGCGTGTTCGGCGTCGTCCGAGAAGGCGG---TCGAGACC 9180
Query 86810 CGCGCGAAGGCCTCCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 86869
||||| || |||| | | |||| || | |||||| ||||| || ||||||
Sbjct 9181 CGCGCAAACATGTCCT---GATAGCTTTCGCCCGCCAGCAGGTAGCGGTCTTCCAGGGTC 9237
Query 86870 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 86901
| | ||| ||| ||||||||||||||
Sbjct 9238 TTCTTGCCGAAATCGGTCAGCAGGGCGTCGCG 9269
Score = 194 bits (214), Expect = 2e-44
Identities = 519/785 (66%), Gaps = 44/785 (6%)
Strand=Plus/Minus
Query 83282 GTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGACCTCGCC 83341
|||||||||| |||||||||||| ||| ||||||||||||| | ||| | |||| |||
Sbjct 14024 GTCGGCGATGAAGCGGATGTACTGTTTGATGTCCTCGGGCGTCATGCCCTGGACCGAGCC 13965
Query 83342 CAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCA---TCCGGCGGCCGGC 83398
|| ||||||| |||||||||| ||| |||| || |||| || || || | |
Sbjct 13964 CATCTCGAAGGCCAGGTCGATGAACTTGTCCTCCATGTTCACCACCGTCTTGCAGCAGTC 13905
Query 83399 GTCGTAG--ATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAAC 83456
| || | || ||| || | | || | ||||| || ||||| | ||
Sbjct 13904 GACGATGTCATCCGCCACTGAG----GGGGTCAC---CGCGCCCGT-CTCCTGATTGAAG 13853
Query 83457 TCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTCG 83516
| || |||||||| |||| |||| ||| || | |||||||| | ||||||
Sbjct 13852 GCATGATACAGCTTGATGATGCCCTCGCAGTGCAGGCTTTCGTCGCGCACCGACCAGGAC 13793
Query 83517 ACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAAC 83576
|||||| | ||||||||||||| | | ||| || |||||||||||| ||||||
Sbjct 13792 ACGATCTGGCCCATGCCCTTCATCTTGTTCTGACGCGGGAAGTTCATCAGCATGGCGAAG 13733
Query 83577 GAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAG- 83635
|| ||| ||||| | ||||| |||| | ||||| ||| | | | | |||
Sbjct 13732 CTGGCGAACAGCTGAACCCCTTCCGAGAAGCCGCCGAACATGGCCAGG--GTCCGGCAGA 13675
Query 83636 -GTCGGCGATCGACGTGCCGCTCTCGCGCTCGAACATGTACTCGTGCTTTTCACGCATCG 83694
||||||| ||| || || | || || | |||||| |||||||| || ||||| |
Sbjct 13674 TGTCGGCG-TCG--CTGTCGACCCCGAACTGGCCCATGTAGTCGTGCTTGTCCCGCATGG 13618
Query 83695 CCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGATCAGGG 83754
||| || |||| |||||||| ||||||| || |||| ||| | ||| || | |||
Sbjct 13617 CCTCGTATTCCATGAAGGCGCCGAACTCGCTTTCCGGCATGCCGATGGTTTCCAGCAGCA 13558
Query 83755 TGGCGTAGGCGNNNNNNNNNNNNNNNTCGGCCGCCAT------GAACGAGGCCAGCATCA 83808
||||||||| || | |||| ||| | |||||||||||
Sbjct 13557 GGGCGTAGGCCGCGATATGGAT------GGTCTCCATATTGCCGAAGGCGGCCAGCATCA 13504
Query 83809 TCCGCACCTCCGGGTGCGG---GAAGCGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCCA 83865
|| ||| || ||| ||| ||| | ||||||| || | |||| | | |
Sbjct 13503 TCTTCACTTC--GGT-CGGTTTGAACACCCGGCCGTAGCGCTCCATGTAGTTGTCCTGAA 13447
Query 83866 CATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTGG 83925
| |||| ||| |||||||||||||||||||||| || || | | |||| |||| |
Sbjct 13446 CCTCGATGTCCGCCTGGGTGAAGAAGCGGAAGATCTGGGTCAACAGGTTGCGTTCGCCGT 13387
Query 83926 GCTTGAGCTTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAGCC 83985
|| || || | |||||||| || ||| | ||| |||| |||| | ||| | ||
Sbjct 13386 CGTTCAGGGTCGAGGCCCAGTCCTTGACGTCCTCGCCCAGCGGCACCTCTTCGGGCATCC 13327
Query 83986 AGTGGA---GCGATTGCATGATCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGGGCT 84042
|||||| || ||| | ||| | |||| | ||||| || ||| ||| ||||
Sbjct 13326 AGTGGACCTGCTGCTGCTTCTTCC---ACATGTCGAACGCCCACGGATAGCGGAACGGCT 13270
Query 84043 TGTAG 84047
|||||
Sbjct 13269 TGTAG 13265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715762588147200
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