Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq752 434 2e-116 seq1179 224 1e-53 >seq752 Length=262051 Score = 434 bits (480), Expect = 2e-116 Identities = 761/1081 (70%), Gaps = 53/1081 (5%) Strand=Plus/Minus Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCTGGTCTTCCAGCGTGAAGGCGGC-CTTGG 139563 ||||||||||||||| |||| || || ||||| || | ||||||| |||| ||||| Sbjct 252540 GCGGCACTCGACGCCAGCGGTGGCGCGGACGTGGTCCTCGACCGTGAAG-CGGCGCTTGG 252482 Query 139564 CGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGT 139623 | |||| || ||||||||| || |||||||||||||| | |||||| || || | Sbjct 252481 CCTCGGTCCGGCTCATGGTCCGACCGGCGCCGTGCGAGCAGGTGCAGAAGCTTTCCGCAT 252422 Query 139624 TGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAACT 139683 |||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| | | Sbjct 252421 TGCCCTTGCCGCGCACGATGAAGGACTTCGCCCCCATCGATCCGGGGATGATGCCCAGTT 252362 Query 139684 GGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGA 139743 | | | || ||||||| |||||| || ||||||| |||||| || | |||| || Sbjct 252361 CGCCGTCCTTGGCCGACATCGCGCCTTTTCGGGTCAGGAAGACATCCTTGCCGAAATGCT 252302 Query 139744 ACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAAGGGCG 139803 |||||| |||||||||||||||||||||||||||||||| ||||| | || Sbjct 252301 TTTCCTTCGAGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTGCGTCGTCTCCAGATCCG 252242 Query 139804 GCAGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCC 139863 || | | ||| || | | || ||| | |||||||| |||||||||| | Sbjct 252241 GCCAGAC---GGCCTTCAGCACCCCAAGCACCTGATCCATCATCACCTCGCGGTTGGCGC 252185 Query 139864 GCGCGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGC--TCGCC 139921 |||| | | ||| |||| | || || || |||||| ||| ||| | || || Sbjct 252184 GCGCATATTTCTGCGCCCACGACACCGCCCGGACATAGTCGATGAA-GCCGTCCGTC-CC 252127 Query 139922 TTCCGACAGCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCCCGACGCAGCATCAT 139981 ||||| | | || ||||||| || || | | ||| || || || ||||| Sbjct 252126 TTCCGGGAAATAGGCCAGGTCCTGATCCGGCAGGT--TGA-TGTGCCAGCGGCGCATCTC 252070 Query 139982 CTCCTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGAGCCCG 140040 | ||||||| |||||||| ||| | ||||| | |||||||| |||||||| || | Sbjct 252069 GTGCTTGGCCCGTTCGATGAA-ATAGGTGCCGAAGCGATTGCCGACACCGCGCGAACCGG 252011 Query 140041 AGTGGAGCATCACCCAGAC-GCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTG 140099 |||| |||||||||||||| ||| | |||| || ||||| | |||||||||||||||| Sbjct 252010 AGTGCAGCATCACCCAGACATCGCCCG-CCTCATCAAGGCACAGCTCGATGAAGTGGTTG 251952 Query 140100 CCGCCGCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCTTGTACTTG 140159 ||| |||||| |||||||| ||| ||| || | ||| || | | |||| Sbjct 251951 CCGGTGCCCAGGGTGCCCAGATGGCCGAAGCCG--CGCG-----GATG--CGCCGCCTTG 251901 Query 140160 TCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCG------AGTCGACCCACTTGCGCATG 140213 | | | ||| | | ||| || ||||| ||| |||| ||| || Sbjct 251900 GGGTGGCG---CTCCACCACGGCGTCATAGCCCGCCTTAAGGTCAGCCCA---GCGGGTG 251847 Query 140214 A---TCGAGTTCG--GGAT--GCCGC---TACGCCCGT-TCCAGCCGCCCGACGGACCCG 140262 | ||| || || | ||||| ||||| | || |||||| || || Sbjct 251846 ACCGCCGAAGCCGGAGGCTCCGCCGCCCAGGCGCCCTTGTCGTTGCGCCCGCCGTTGTCG 251787 Query 140263 G-CCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCG--AGGCTGTCGG 140319 | | ||||||||| |||||| |||||| ||| | || | | | || ||| ||| | Sbjct 251786 GTGCGGCCGTGCGGAACGGCGGCCTCGAT-GGCG-GAGCGGATGGCCGACAGGTCGTCAG 251729 Query 140320 GCAGGTCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGC 140379 |||||| | |||| | |||||| ||||| |||||||||||||||||||||||||||| Sbjct 251728 GCAGGTGCTCGGCCCGGATCGAGGTCCGCACCGCCATCATGCCGCAGCCGATGTCCACGC 251669 Query 140380 CCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGA 140439 ||||||| || || ||||| || ||| |||||||||||| || ||||| |||| || | Sbjct 251668 CCACGGCGGCGGGAATGATCGCCCCCACGGTCGGGATCACGGAACCCACCGTCGCCCCCA 251609 Query 140440 TGCCCATGTGGACGTCCGGCATCAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCGA 140499 ||||| ||| ||||| ||||| | || ||||| |||||||||||||| | ||| | Sbjct 251608 TGCCCCAGTGCACGTCGGGCATGACCGCGACATGTTTATGGATGAACGGCAGCGAGGCCA 251549 Query 140500 GGTTGTGCGCCTGCACCTGGGCGGGCTGCTCGAAGGTCACACCCCGGACCCAGGCCTTGA 140559 ||| | | ||| | | || | | ||||| || ||| || ||| ||||||||||| Sbjct 251548 CGTTCTTCAGCTGTTTCAGCGCCGCATCCTCGATGGGCACGCCTCGGGTCCAGGCCTTGA 251489 Query 140560 T 140560 | Sbjct 251488 T 251488 >seq1179 Length=40310 Score = 224 bits (248), Expect = 1e-53 Identities = 550/835 (66%), Gaps = 63/835 (8%) Strand=Plus/Plus Query 84363 TGGCGTCGTGCGGGTGGAAGACGTTCAGGGACTGGCCCTGGCAGATGTCCTCCGTCCGCC 84422 || ||||| ||| ||| | |||||| |||||| |||||||||| ||| || || Sbjct 7697 TGACGTCGCCGGGGATGAACAGGTTCAGCGACTGGGCCTGGCAGATTTCCGGCGCGCGGT 7756 Query 84423 CGACGGCCAGCCGCACGACCCAGCGCTGGTCGAGTTCCATCGCCGTCTTGTAGACGCGCT 84482 || ||||||| || |||||||||||||| ||||| | || |||||| | |||| || Sbjct 7757 CGGCGGCCAGTTCGACCACCCAGCGCTGGTCCAGTTCGAAGGCGGTCTTGAACACGCCCT 7816 Query 84483 TCTTGTGGTCCAGGACCGCCGGGTCGACTTCGATGCCCAGGGCCTCGAAGAACTCGACCG 84542 ||| || ||||| | |||||| |||| | Sbjct 7817 TCTCGT---------------------CTTCGTT---CAGGGCGTCGATG---------- 7842 Query 84543 AGAAGTGCTGGATCGAGCCCTCGTTGGCGACGATGGTCTTCCAGACCTCATCGGTGTCGG 84602 ||||| | |||||| |||| | | ||| | |||||||| | ||||||| | Sbjct 7843 -----TGCTGAACCGAGCCTTCGTGCTCCAGGATCGAGTTCCAGACGGCCTCGGTGTTGA 7897 Query 84603 CGCCCAGGCTCGCCAGCCACGCGCGC-AGCCAGCGGTTCTTGACCTGGAACGAACCCGAG 84661 |||| |||| | || |||| | || || ||||||||||| |||||| ||||| Sbjct 7898 TGCCCTT-CTCGTCGAGCAGGCGCTCCAGATAGGGGTTCTTGACCGCGAACGAGCCCGAC 7956 Query 84662 AGGGTCTTGTGCAGGAAGGTGTTGGCGCGGTTGGGCTCGATCGACGGCGAAGCGCCGCCG 84721 |||||||||||| || ||||||| || | |||||||| || || | ||||||| Sbjct 7957 AGGGTCTTGTGCGTATAGATGTTGGCCGGGATCGGCTCGATGCCCGCAGACGTGCCGCCG 8016 Query 84722 CAGAGGATCGACGAGGAGGCGTTGGGGGCCACCGCCAGCTTGTGGGCGAAGCGCT----- 84776 |||| |||||| |||||| | ||||| | |||||||||||| ||| |||| Sbjct 8017 CAGATGATCGAGATCGAGGCGGTTGGGGCGATGGCCAGCTTGTGGCTGAACCGCTCCATG 8076 Query 84777 -CGCC-CGAGCCT-----TCCATGTCAGGGGCCTCGCCGCGCTCGGCGCCCAGGACCAGC 84829 |||| || ||| |||| | |||| | || ||| || ||||| || Sbjct 8077 ACGCCGCGGTCCTGAGCGTCCA-GGCAGG-----CCCCCTTCTCTTCGGCCAGG--GTGC 8128 Query 84830 GAC--GCCGCGTCGGCCTTGCGGCGCATGTGGCGGAAGATGGTCTTATTGAGCGTCTCGG 84887 | | ||| |||||||| |||||||| || ||| | | | || || || || Sbjct 8129 GGCTGGCCTTGTCGGCCTCGCGGCGCAGATGCTTGAACAGACGCATGTTCCACGACTTGG 8188 Query 84888 CCGCCATGCTCTCGAACGGGATGTCGAGCGACTGGAGCAGCGAGTGGAAGCCCAGCAGGC 84947 || ||| ||||| | || | | | ||| || | ||||||||||||| ||||| Sbjct 8189 CCATGGCGCTTTCGAAGGCGACGCCCTGACCCTGCAGGAAGGAGTGGAAGCCCATCAGGC 8248 Query 84948 CCAGGCCCACCGAGCGCTCGCGCACGGCGCTGTAGGAGGCCCGGTGCATCTCGTCCGGCG 85007 |||| |||||||| ||||||||| ||| ||| ||| | ||| || ||| | Sbjct 8249 CCAGACCCACCGAACGCTCGCGCTTGGCCGAATAGACGGCGGCGGCCATGGCGGGCGGGG 8308 Query 85008 CGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCATCAGGTCTTCGATGAAGG 85067 || || |||||| |||| || |||||||| | ||||||||||| ||||||||| Sbjct 8309 CGCGGTTGATGAAGTCCTGCAGCACATTGTCCAGGAACCGCATCAGGTCCTCGATGAAGC 8368 Query 85068 TCGGGTGATCCTTCCATTCGACCCACTTTTCGGCGTTGACGCTCGACAGGCAGCAGACGG 85127 || | || ||| || | | | ||||||||||| ||||||||||||||||| Sbjct 8369 GGGGCTCTTCGCGCCACTCCAGGAAGGTCTCGGCGTTGACCGACGACAGGCAGCAGACGG 8428 Query 85128 CCGTGCGCATCTTGCCGAACACGTCGCGGCCGGTGCCCAGCATGATCTCCGAGCA 85182 | ||||| | ||| | ||| ||||||| ||||||||| || | ||| Sbjct 8429 CGGTGCGGTCCACGCCCAGGTGGTCCTTGCCGGTGTGCAGCATGATTTCGGCGCA 8483 Score = 214 bits (236), Expect = 3e-50 Identities = 544/812 (67%), Gaps = 38/812 (5%) Strand=Plus/Plus Query 86106 CGCAGAGGTTCGACTGGCGAACGCTCAGGCCAAGCTTCTTCTGCCGGTCCGGGAAGTGGC 86165 |||| ||||||||||| || ||||||| || | ||| | || | |||| Sbjct 8480 CGCACAGGTTCGACTGTTTGACCTTCAGGCCCAGGTCGCGCTGGTGCGGCGCCATCTGGC 8539 Query 86166 GGTTGGAGGTGTCGATGAAGTGGATGTAGGGCTCGCCCGTCTGCACGCGCGTCTCGATCA 86225 |||| ||||| |||| | ||||||||||| ||||||| ||| | |||| || Sbjct 8540 GGTTCACCGTGTCCGAGAAGATCAGATAGGGCTCGCCGGTCTGCATGCGGATGTCGAGCA 8599 Query 86226 GCAGGCGCCACAGGTCGCGCGCCCGTTCCATGCGGATCA---CCTCGCCCGTCTTGGGCG 86282 || | |||||| || ||| ||| | | | ||| | ||||| |||||||| Sbjct 8600 GCTTGGTCCACAG--CGAGCGGGCGT-CGACGGTCTTCAGGACTTCGCCGTCCTTGGGCG 8656 Query 86283 AGCGCAGGGCGAAGTCGGTGTCGTCGCGCACCGCGATCATGAACTCGTCGGTGACGTTGA 86342 | ||| ||||| || | || |||||| ||||||||||||||||| ||||| Sbjct 8657 ACTTGAGGTCGAAGGTGGCGCCGATCTTCACCGCCTCCATGAACTCGTCGGTGATGTTGA 8716 Query 86343 CCGCATTGTGCAGGTTGGTGATCTTGCGGTTGTGGTCCCCGCCCGTCGGCTTGCGCGCGG 86402 | | |||||| || | |||||||||| ||| ||||| || ||||| Sbjct 8717 TGCCGTGGTGCAGATTCAGGGACTTGCGGTTGAAGTC---GCCCGAGGGTTTGCGGATCT 8773 Query 86403 TGATGAACTCGCGGATTTCGGGGTGGTGGATGTCCAGGTAGACGGCGTTGGAGCCCCGGC 86462 | ||| || ||| || ||||| ||||||||||| ||||||||| || || |||| Sbjct 8774 CAAGGAATTCCTCGATCTCCGGGTGATGGATGTCCAGATAGACGGCGGCCGAACCGCGGC 8833 Query 86463 GCGTACCGCCCTGGCTGACGGCCAGGATCAGGCGGTCGTCCACCGCCATGAACGGGATGA 86522 || |||||| | |||||| |||| ||| ||| ||||| ||||||| Sbjct 8834 GCAGCGAGCCCTGCGAAATCGCCAGGGTCAGTGAGTCCATCACGCGGATGAAGGGGATGA 8893 Query 86523 CGCC---GGTC--GACTGCGAACCCTTGGAGGTCTTCTCGCCCAGGCCGCGCAGGGCGCC 86577 ||| |||| | | ||| |||||| ||||||||| | | ||| | | |||| Sbjct 8894 TGCCCGAGGTCTTGCCCGCG--CCCTTGAC---CTTCTCGCCGATGGAGCGGACGCCGCC 8948 Query 86578 GTAATAGGAGCCGATGCCGCCGCCCATCGACGACAGCCAGATGACCTCGT--CATA-GTG 86634 | |||| ||||||||||||||| |||| | ||| | | ||||| || | || Sbjct 8949 CCAGTAGGTGCCGATGCCGCCGCCGTTCGAGGCCAGGGCCACGTTCTCGTTCCAGACGTT 9008 Query 86635 CTCGGAGATCGACTCGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCC 86694 || ||| || || ||||||| | | |||| | |||||||||||||| |||||||| Sbjct 9009 CT-GGATGCCG--TCCAGGCTGTCGCCCACCGCGTTCAGGAAGCAGGAGATGGGCAGGCC 9065 Query 86695 ACGGGCCGAGCCGCCGTTCGACAGCAGCGGGGTGGCGTACATGAACCAGAGGTTCGAGAC 86754 ||| | | |||||||||||||| | ||||| ||| ||||||||| ||| || | Sbjct 9066 GCGGTCGGCACCGCCGTTCGACAGGACGGGGGTCGCGGGCATGAACCACAGG--CGGCTC 9123 Query 86755 GTAT--TCGTACAGACGCTGGCCGTGCTCGGCGTCATCCGCAAAGGCCGCACTCG---CG 86809 ||| || || || |||||| |||| |||||||| |||| ||||| | ||| | Sbjct 9124 ATATAGTCATAAAGGCGCTGGGCGTGTTCGGCGTCGTCCGAGAAGGCGG---TCGAGACC 9180 Query 86810 CGCGCGAAGGCCTCCTGGGGGGAAGTTTCCCCAGGCAGCAGATAGCGTTCACGGAGGGTC 86869 ||||| || |||| | | |||| || | |||||| ||||| || |||||| Sbjct 9181 CGCGCAAACATGTCCT---GATAGCTTTCGCCCGCCAGCAGGTAGCGGTCTTCCAGGGTC 9237 Query 86870 TGAAGGGTGAAGTCGTCGAGCAGGGCGTCGCG 86901 | | ||| ||| |||||||||||||| Sbjct 9238 TTCTTGCCGAAATCGGTCAGCAGGGCGTCGCG 9269 Score = 194 bits (214), Expect = 2e-44 Identities = 519/785 (66%), Gaps = 44/785 (6%) Strand=Plus/Minus Query 83282 GTCGGCGATGTAGCGGATGTACTTCTTGGTGTCCTCGGGCGTGACGCCGTCGACCTCGCC 83341 |||||||||| |||||||||||| ||| ||||||||||||| | ||| | |||| ||| Sbjct 14024 GTCGGCGATGAAGCGGATGTACTGTTTGATGTCCTCGGGCGTCATGCCCTGGACCGAGCC 13965 Query 83342 CAGGGCGAAGGCTTGGTCGATGAAGGCGTCTTCCAGGTCGACCA---TCCGGCGGCCGGC 83398 || ||||||| |||||||||| ||| |||| || |||| || || || | | Sbjct 13964 CATCTCGAAGGCCAGGTCGATGAACTTGTCCTCCATGTTCACCACCGTCTTGCAGCAGTC 13905 Query 83399 GTCGTAG--ATGCGCTTCTTGGTCTCGTCGTTCCAGGCGCGCGGGTGCTCCTTGATCAAC 83456 | || | || ||| || | | || | ||||| || ||||| | || Sbjct 13904 GACGATGTCATCCGCCACTGAG----GGGGTCAC---CGCGCCCGT-CTCCTGATTGAAG 13853 Query 83457 TCGTGCAGGAGCTTGATCATGCTCTCGACGTGGTGGGTCTCGTCGCGGATCGACCACTCG 83516 | || |||||||| |||| |||| ||| || | |||||||| | |||||| Sbjct 13852 GCATGATACAGCTTGATGATGCCCTCGCAGTGCAGGCTTTCGTCGCGCACCGACCAGGAC 13793 Query 83517 ACGATCGTGGTCATGCCCTTCATCAGGCCGCGCCGCTGGTAGTTCATCAGCAGGGCGAAC 83576 |||||| | ||||||||||||| | | ||| || |||||||||||| |||||| Sbjct 13792 ACGATCTGGCCCATGCCCTTCATCTTGTTCTGACGCGGGAAGTTCATCAGCATGGCGAAG 13733 Query 83577 GAGGAGAAAAGCTGCATGCCTTCGCCGAAGGCCGAGAACACGGCGATGTCGACGATCAG- 83635 || ||| ||||| | ||||| |||| | ||||| ||| | | | | ||| Sbjct 13732 CTGGCGAACAGCTGAACCCCTTCCGAGAAGCCGCCGAACATGGCCAGG--GTCCGGCAGA 13675 Query 83636 -GTCGGCGATCGACGTGCCGCTCTCGCGCTCGAACATGTACTCGTGCTTTTCACGCATCG 83694 ||||||| ||| || || | || || | |||||| |||||||| || ||||| | Sbjct 13674 TGTCGGCG-TCG--CTGTCGACCCCGAACTGGCCCATGTAGTCGTGCTTGTCCCGCATGG 13618 Query 83695 CCTGATAGTCCAGGAAGGCGCGGAACTCGACCTCGGGCAGGCCCAGGGTGTCGATCAGGG 83754 ||| || |||| |||||||| ||||||| || |||| ||| | ||| || | ||| Sbjct 13617 CCTCGTATTCCATGAAGGCGCCGAACTCGCTTTCCGGCATGCCGATGGTTTCCAGCAGCA 13558 Query 83755 TGGCGTAGGCGNNNNNNNNNNNNNNNTCGGCCGCCAT------GAACGAGGCCAGCATCA 83808 ||||||||| || | |||| ||| | ||||||||||| Sbjct 13557 GGGCGTAGGCCGCGATATGGAT------GGTCTCCATATTGCCGAAGGCGGCCAGCATCA 13504 Query 83809 TCCGCACCTCCGGGTGCGG---GAAGCGCGGGCCGTACTTTTCGAAGTAGCCGCGCGCCA 83865 || ||| || ||| ||| ||| | ||||||| || | |||| | | | Sbjct 13503 TCTTCACTTC--GGT-CGGTTTGAACACCCGGCCGTAGCGCTCCATGTAGTTGTCCTGAA 13447 Query 83866 CATCGACGTCGGCCTGGGTGAAGAAGCGGAAGAGTTGCGTAAGCTGGTTCTTCTCGCTGG 83925 | |||| ||| |||||||||||||||||||||| || || | | |||| |||| | Sbjct 13446 CCTCGATGTCCGCCTGGGTGAAGAAGCGGAAGATCTGGGTCAACAGGTTGCGTTCGCCGT 13387 Query 83926 GCTTGAGCTTCTCGTTCCAGTCCTGGATGTCGGTGTCCATCGGCGCCTCGTGGGGGAGCC 83985 || || || | |||||||| || ||| | ||| |||| |||| | ||| | || Sbjct 13386 CGTTCAGGGTCGAGGCCCAGTCCTTGACGTCCTCGCCCAGCGGCACCTCTTCGGGCATCC 13327 Query 83986 AGTGGA---GCGATTGCATGATCCGGTAGGCGTCGTAGGCCCAGGGGTAGGCGAAGGGCT 84042 |||||| || ||| | ||| | |||| | ||||| || ||| ||| |||| Sbjct 13326 AGTGGACCTGCTGCTGCTTCTTCC---ACATGTCGAACGCCCACGGATAGCGGAACGGCT 13270 Query 84043 TGTAG 84047 ||||| Sbjct 13269 TGTAG 13265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715762588147200