Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019446.1
Length=41148
Score E
Sequences producing significant alignments: (Bits) Value
seq97 295 2e-75
>seq97
Length=479585
Score = 295 bits (326), Expect = 2e-75
Identities = 214/248 (86%), Gaps = 0/248 (0%)
Strand=Plus/Minus
Query 28035 TCCCAATACGCTTGCAGCATAATCTCTGTCGGCTCCTGTAGAGCGGCGCGGATGGTGGAG 28094
|||||| ||||| |||| ||||||||||||||||||||| ||| |||||||||||
Sbjct 271826 TCCCAAGCTGCTTGGCGCATCCCCTCTGTCGGCTCCTGTAGAGCAGCGAGGATGGTGGAG 271767
Query 28095 ATGGCGGCTTTTGCACCAGCCAAGCACAGACTTCGTTCCACGTCATTGATCTGTTGCCAG 28154
| |||||| | ||| || ||||||||||| ||||||||| ||||| || ||||||||
Sbjct 271766 AAGGCGGCCTCTGCGCCGGCCAAGCACAGCTTTCGTTCCATTTCATTAATTTGTTGCCAC 271707
Query 28155 CGAACATCGCGAAGCTGGTCCAACGTGAATAGCGATCCTTCCGGCACAGGGTGGAAAGGT 28214
|||| |||||||||||| |||| |||| | |||| ||||||||||||||| ||||||||
Sbjct 271706 CGAATATCGCGAAGCTGATCCAGCGTGTACGGCGACCCTTCCGGCACAGGGCGGAAAGGT 271647
Query 28215 CCGTTGATGGCCTTTGCCACCTTCTCGACAAGTGCTTCGTGTTCCTTACTAGGCATTGCT 28274
||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| ||||
Sbjct 271646 CCGTTGATGGCCTTTGCAACCTTCTCGACAAGAGCTTCGTGTTCCTTACTCGGCAATGCT 271587
Query 28275 GGCCTCCT 28282
||||||||
Sbjct 271586 GGCCTCCT 271579
Score = 93.3 bits (102), Expect = 1e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 29314 CCACCGTCACCAACTCCCCGCACTTGCCGTCAGCATCCGGCGATACTGGAGTAACGGGGG 29373
|||||||| |||||||||||||||||||| ||||||||||||||| |||| |||||||
Sbjct 270077 CCACCGTCTCCAACTCCCCGCACTTGCCGGTAGCATCCGGCGATACGGGAGCGACGGGGG 270018
Query 29374 TGGGGC 29379
||||||
Sbjct 270017 TGGGGC 270012
Score = 89.7 bits (98), Expect = 1e-13
Identities = 61/67 (91%), Gaps = 4/67 (6%)
Strand=Plus/Minus
Query 30663 TCGACATGCCACCCATCCCCCTCGACCTTACCGGCGTCGGCAATATGGTCCGGGGAGGAT 30722
||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 268913 TCGGCAT-CCACCCATCCCCCTCGACCTTACCGGCGTCGGC---TTGGTCCGGGGAGGAT 268858
Query 30723 AGGGCGC 30729
|||||||
Sbjct 268857 AGGGCGC 268851
Score = 82.4 bits (90), Expect = 2e-11
Identities = 50/53 (94%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 30894 GCGGAGAGGATGCGAGCCTCATAGTCGGCCTGTGCGGCGGCTTTGGCGGCTTC 30946
||||| ||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 268623 GCGGACAGGATGCGAGCCTCATAATCGGCCTGTGCAGCGGCTTTGGCGGCTTC 268571
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 131549658292180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |