Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= NC_019447.1 Length=38253 Score E Sequences producing significant alignments: (Bits) Value seq97 295 2e-75 >seq97 Length=479585 Score = 295 bits (326), Expect = 2e-75 Identities = 214/248 (86%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 25140 TCCCAATACGCTTGCAGCATAATCTCTGTCGGCTCCTGTAGAGCGGCGCGGATGGTGGAG 25199 |||||| ||||| |||| ||||||||||||||||||||| ||| ||||||||||| Sbjct 271826 TCCCAAGCTGCTTGGCGCATCCCCTCTGTCGGCTCCTGTAGAGCAGCGAGGATGGTGGAG 271767 Query 25200 ATGGCGGCTTTTGCACCAGCCAAGCACAGACTTCGTTCCACGTCATTGATCTGTTGCCAG 25259 | |||||| | ||| || ||||||||||| ||||||||| ||||| || |||||||| Sbjct 271766 AAGGCGGCCTCTGCGCCGGCCAAGCACAGCTTTCGTTCCATTTCATTAATTTGTTGCCAC 271707 Query 25260 CGAACATCGCGAAGCTGGTCCAACGTGAATAGCGATCCTTCCGGCACAGGGTGGAAAGGT 25319 |||| |||||||||||| |||| |||| | |||| ||||||||||||||| |||||||| Sbjct 271706 CGAATATCGCGAAGCTGATCCAGCGTGTACGGCGACCCTTCCGGCACAGGGCGGAAAGGT 271647 Query 25320 CCGTTGATGGCCTTTGCCACCTTCTCGACAAGTGCTTCGTGTTCCTTACTAGGCATTGCT 25379 ||||||||||||||||| |||||||||||||| ||||||||||||||||| |||| |||| Sbjct 271646 CCGTTGATGGCCTTTGCAACCTTCTCGACAAGAGCTTCGTGTTCCTTACTCGGCAATGCT 271587 Query 25380 GGCCTCCT 25387 |||||||| Sbjct 271586 GGCCTCCT 271579 Score = 93.3 bits (102), Expect = 1e-14 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 26419 CCACCGTCACCAACTCCCCGCACTTGCCGTCAGCATCCGGCGATACTGGAGTAACGGGGG 26478 |||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||||| Sbjct 270077 CCACCGTCTCCAACTCCCCGCACTTGCCGGTAGCATCCGGCGATACGGGAGCGACGGGGG 270018 Query 26479 TGGGGC 26484 |||||| Sbjct 270017 TGGGGC 270012 Score = 89.7 bits (98), Expect = 1e-13 Identities = 61/67 (91%), Gaps = 4/67 (6%) Strand=Plus/Minus Query 27768 TCGACATGCCACCCATCCCCCTCGACCTTACCGGCGTCGGCAATATGGTCCGGGGAGGAT 27827 ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 268913 TCGGCAT-CCACCCATCCCCCTCGACCTTACCGGCGTCGGC---TTGGTCCGGGGAGGAT 268858 Query 27828 AGGGCGC 27834 ||||||| Sbjct 268857 AGGGCGC 268851 Score = 82.4 bits (90), Expect = 2e-11 Identities = 50/53 (94%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 27999 GCGGAGAGGATGCGAGCCTCATAGTCGGCCTGTGCGGCGGCTTTGGCGGCTTC 28051 ||||| ||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 268623 GCGGACAGGATGCGAGCCTCATAATCGGCCTGTGCAGCGGCTTTGGCGGCTTC 268571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122285823197170