Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_019485.1
Length=59080
Score E
Sequences producing significant alignments: (Bits) Value
seq1008 141 4e-29
seq1007 141 4e-29
>seq1008
Length=53843
Score = 141 bits (156), Expect = 4e-29
Identities = 220/307 (72%), Gaps = 13/307 (4%)
Strand=Plus/Minus
Query 43727 TCAGAGTCAAAATCCATGGATTCACGGGAGAATTCATAGAAGAAACCCATCTTATGCATG 43786
|| ||||| ||||||| |||||| ||| ||| || |||||||| || | ||| || ||
Sbjct 21294 TCCGAGTCGAAATCCAGGGATTCCTGGGTGAACTCGTAGAAGAAGCCGAACTTGTGGATC 21235
Query 43787 GAGCCTTCAATAACTTTACGGGTGAAACCAACACGGTTAACACGACCACCGGTTTCAGAC 43846
|| |||||| ||||||||| || |||||||| ||||| |||||| |||| |||
Sbjct 21234 GAACCTTCACGGGAAAGACGGGTGAAGCCGACACGGTTCACACGGCCACCGTTTTCGGAC 21175
Query 43847 AGGGTAGGCAGTTTGCTTGAGATAGTACCTACGTCA--CGACTTGAACCATAGATATTAC 43904
|| || || ||| | ||| | || ||||| ||| |||||||||| ||| |
Sbjct 21174 AGCACCGGAAGCTTGGAGGTGATGGAGCCAACGTCCTTCGAG--GAACCATAGAGATTGC 21117
Query 43905 CATTAGCGTACTGTG-CGCCTTTAGCATCAATACCCTGATCGTTGACGTTCAG---ATCG 43960
|||| || | ||| |||| ||| || |||||||| ||||||||||| | ||||
Sbjct 21116 CATTGGCAATC-GTGACGCCGGAAGCGTCGATACCCTGGTCGTTGACGTTGCGTGCATCG 21058
Query 43961 CTCAGTAAAGGCATATAGTGATAAGCCTTAATAGTCTTACCAAAATGCTTAGGCATGTT- 44019
|| | ||||| ||| | || |||| || ||||| || ||||||| ||||||||
Sbjct 21057 ---AGCAGAGGCACATATTCATGCACCTTGATCGTCTTGCCGTAATGCTTCGGCATGTTG 21001
Query 44020 ACGGACG 44026
|||| ||
Sbjct 21000 ACGGTCG 20994
>seq1007
Length=53843
Score = 141 bits (156), Expect = 4e-29
Identities = 220/307 (72%), Gaps = 13/307 (4%)
Strand=Plus/Minus
Query 43727 TCAGAGTCAAAATCCATGGATTCACGGGAGAATTCATAGAAGAAACCCATCTTATGCATG 43786
|| ||||| ||||||| |||||| ||| ||| || |||||||| || | ||| || ||
Sbjct 21294 TCCGAGTCGAAATCCAGGGATTCCTGGGTGAACTCGTAGAAGAAGCCGAACTTGTGGATC 21235
Query 43787 GAGCCTTCAATAACTTTACGGGTGAAACCAACACGGTTAACACGACCACCGGTTTCAGAC 43846
|| |||||| ||||||||| || |||||||| ||||| |||||| |||| |||
Sbjct 21234 GAACCTTCACGGGAAAGACGGGTGAAGCCGACACGGTTCACACGGCCACCGTTTTCGGAC 21175
Query 43847 AGGGTAGGCAGTTTGCTTGAGATAGTACCTACGTCA--CGACTTGAACCATAGATATTAC 43904
|| || || ||| | ||| | || ||||| ||| |||||||||| ||| |
Sbjct 21174 AGCACCGGAAGCTTGGAGGTGATGGAGCCAACGTCCTTCGAG--GAACCATAGAGATTGC 21117
Query 43905 CATTAGCGTACTGTG-CGCCTTTAGCATCAATACCCTGATCGTTGACGTTCAG---ATCG 43960
|||| || | ||| |||| ||| || |||||||| ||||||||||| | ||||
Sbjct 21116 CATTGGCAATC-GTGACGCCGGAAGCGTCGATACCCTGGTCGTTGACGTTGCGTGCATCG 21058
Query 43961 CTCAGTAAAGGCATATAGTGATAAGCCTTAATAGTCTTACCAAAATGCTTAGGCATGTT- 44019
|| | ||||| ||| | || |||| || ||||| || ||||||| ||||||||
Sbjct 21057 ---AGCAGAGGCACATATTCATGCACCTTGATCGTCTTGCCGTAATGCTTCGGCATGTTG 21001
Query 44020 ACGGACG 44026
|||| ||
Sbjct 21000 ACGGTCG 20994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 188931036849596
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |